Antiquaquibacter oligotrophicus: LH407_02070
Help
Entry
LH407_02070 CDS
T09620
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aog
Antiquaquibacter oligotrophicus
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aog03016
]
LH407_02070 (truB)
Enzymes [BR:
aog01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LH407_02070 (truB)
Transfer RNA biogenesis [BR:
aog03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LH407_02070 (truB)
Prokaryotic type
LH407_02070 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UDF13661
LinkDB
All DBs
Position
complement(416479..417405)
Genome browser
AA seq
308 aa
AA seq
DB search
MVARQSESVAPGILLVDKPTGLTSHGVVARARRALGTRKIGHAGTLDPMATGLLVLGIGS
ATRLLTWMVGLDKTYETTIRLGARTTTDDAEGDITSRATPTDVDAITDDRVREEVARLTG
PILQRPSAVSAIKVDGKRAYARVREGEAVELPERPVTVHSFEVFGLTRGQDSDGQWIEVT
ATVECSSGTYIRALARDLGDALGVGGYLTALRRTRVGVFDVMDAAAIDDELAKHVVSPAD
VAARLFPVVELDAATTVDLGHGKRVALDTPDASPVAAVDPHGRLVGLVTVTNGTARVLTN
FPVEDPSS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccaggcaatcggaatccgtggcgcccggcatcctcctcgtcgacaaaccgacc
ggactcacgagccacggtgtggttgcccgggcccgtcgtgccctcggaacacgcaagatc
gggcatgccggaacgctcgatcccatggcgaccggtcttctggtgttgggcatcggctct
gcgacgcgactgctcacctggatggtcggactcgataaaacctacgagacgacgatccgc
ctcggtgcacgcacgaccactgacgacgccgagggcgacatcacctcacgcgctacaccg
acggacgttgacgcaatcaccgacgaccgcgtgcgtgaggaggtggcgcggctcaccggg
ccgatcctacagcggccgagcgccgtcagtgcgatcaaggtcgacgggaaacgcgcctac
gccagggtgcgtgagggcgaagcggtggagttgccggagcgtcccgttaccgtgcacagc
ttcgaggtgttcggactcacgcgcgggcaggactccgacggccagtggatcgaggtcacg
gcgacggtcgagtgttcgtcgggcacctacatccgtgccctggcccgagatctcggcgac
gcgctcggtgtcgggggatacctcaccgcgctccgacgaacgcgtgtcggagtgttcgac
gtgatggatgccgcggcgatcgacgacgagctcgcgaagcacgtcgtttcgccagccgac
gttgccgctcgtctcttccccgtcgtcgaactcgacgcggccacaaccgtggacttgggt
catggcaaacgtgttgctctcgatacgccggacgcctcgccggtcgcggccgtcgaccca
cacggccgacttgtcgggctcgtgaccgttacgaatggcaccgctcgcgtgctcaccaat
tttcccgtggaggatccgtcgtcatga
DBGET
integrated database retrieval system
