Antiquaquibacter oligotrophicus: LH407_02515
Help
Entry
LH407_02515 CDS
T09620
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
aog
Antiquaquibacter oligotrophicus
Pathway
aog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LH407_02515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aog03400
]
LH407_02515
Enzymes [BR:
aog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LH407_02515
DNA repair and recombination proteins [BR:
aog03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LH407_02515
Prokaryotic type
LH407_02515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF5671
DUF6687
Motif
Other DBs
NCBI-ProteinID:
UDF13748
LinkDB
All DBs
Position
complement(507487..508164)
Genome browser
AA seq
225 aa
AA seq
DB search
MTPKPLSELVTPDWAAALEPVADDIARMGDFLRAETEAGRRYLPAGENVLRAFTYPLSEV
RVLIVGQDPYPTPGHPIGLSFAVDRHVRPVPRSLQNIYRELRDDLGIEPPEHGDLTAWAQ
GGVMLLNRVLTVRAGAAGSHRGKGWERVTETAIRALVTRGGPLVAVLWGRDAATLEPMLG
DTPIIRSAHPSPLSAHGGFFGSRPFSRANELLVAAGGSPVDWRLT
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgacaccgaagccgctcagcgagctcgtcactccggactgggccgcagcgctcgagccc
gtcgcggacgacattgcgaggatgggcgacttcctccgagcggagaccgaggccggtcgc
cgttaccttcctgccggcgaaaacgtcctccgcgcgttcacgtatccgttgagcgaggtc
agggtgctcatcgtcgggcaagacccctacccgacacccgggcatccgatcgggctctcc
ttcgccgttgaccggcacgtgcgtcccgtgccgaggagtcttcagaacatctatcgggag
ctccgagacgatctcggcatcgagccgcccgagcacggcgatctgaccgcgtgggcgcag
ggcggggtcatgttgctcaatcgtgtgttgacggtgcgggcgggggccgcaggatcacac
cgcggcaagggctgggagcgtgtgacggagacggcgattcgcgcgctcgtgacgcgcggc
ggcccgctcgtcgctgtgctgtgggggcgggatgccgcgaccctcgagcccatgctgggt
gacaccccgatcatccgatcggcacatccgagccctctttctgctcacggaggattcttc
ggatcgcgcccgttctcgcgagccaacgaactcctggtcgctgcgggaggctcgcccgtc
gactggcggctcacctga
DBGET
integrated database retrieval system
