Antiquaquibacter oligotrophicus: LH407_03215
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Entry
LH407_03215 CDS
T09620
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
aog
Antiquaquibacter oligotrophicus
Pathway
aog00260
Glycine, serine and threonine metabolism
aog00630
Glyoxylate and dicarboxylate metabolism
aog00670
One carbon pool by folate
aog00785
Lipoic acid metabolism
aog01100
Metabolic pathways
aog01110
Biosynthesis of secondary metabolites
aog01200
Carbon metabolism
Module
aog_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LH407_03215 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LH407_03215 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LH407_03215 (gcvP)
00670 One carbon pool by folate
LH407_03215 (gcvP)
Enzymes [BR:
aog01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
LH407_03215 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UDF13880
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All DBs
Position
complement(647259..650120)
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AA seq
953 aa
AA seq
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MTEPFVSRHIGLDRDAEATMLAAVGYSSVDELVRAAVPTAIQASPVEHSTIPPAASERQA
LTELRAIASRNRVRRSMIGLGYYDTITPAVIQRNVLENPSWYTAYTPYQPEISQGRLEAL
INFQTMIADLTGLATANASMLDEGTAVVEAMLLARRVSGSSSNVFLVDADALPQTKRLLA
HRAEAVGIQLQEFSIGAELPEAFGGVIQYPGASGRVVDPSAAIAAIKEHGGVAVVAADLL
ALTLLASPGDLGADVAVGTSQRFGVPMGFGGPHAGFMAVRSGLERQLPGRLVGVSQDASG
QPAYRLSLQAREQHIRREKATSNICTAQVLLAVMASMYAVYHGPDGLKRIAQHVHGAAVL
AAKELKARGLELVHAHFFDTLAVRVTDAAAVVTAAGERGILLTAIDDATVSLAFDEVSAD
DLAEVLPALLESLAPGVERGPLDGEGVFAPDEERWFAFSPLTAHEYPPELARSSPYLTHP
VFSTHRSETSMMRYLKYLADKDYALDRGMIPLGSCTMKLNAATEMASITWPEFANIHPFA
PDSDTEGYRELVGELEDWLAEVTGYDAVSLQPNAGSQGELAGLLAIRGYHRSRGDNQRTV
CLIPSSAHGTNAASAVLAGMRVVVVACDDLGNVDLDDLRAKIAQHADELAALMITYPSTH
GVYEHDVLDITAAVHEAGGQVYVDGANLNALLGYARFGDFGGDVSHLNLHKTFCIPHGGG
GPGVGPVAAKAHLAEFLPRGSENPVSSAPYGSAGILPISWAYVRMMGTEGLTKATGAAVL
AANYVAVRLRDHFPVLYSGDNGLVAHECILDLRPLKAATGIDNNDVAKRLIDYGFHAPTM
SFPVAGTLMVEPTESEDLAEIDRFIDAMIAIKEEADAVAAGVWPANDNPLVNSPHTAVSV
IEGEWQHAYSRELAVYPLRSIIRQKYWPPVRRVDNAYGDRNLMCACPPIEAFA
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
gtgactgagccgttcgtttcccgtcacatcggcctggatcgcgacgctgaggcgacgatg
ctcgccgcagtcggttactcgtcggtcgatgagctggttcgtgccgcggttccgaccgcg
atccaggcatccccggtggagcattccaccattccgccggccgcgagtgaacgccaggcc
ctcaccgagttgcgcgcgatcgcgtcgcgtaatcgtgtacgccggtcgatgatcggtctc
ggctactacgacacgatcacaccagccgtgattcagcgcaacgtactcgaaaacccgagt
tggtatacggcgtacacgccctaccagccggagatctcccaggggcgcctcgaggctctc
atcaacttccagacgatgatcgccgacctcacggggcttgcgaccgcgaacgcgtccatg
ctcgatgagggcacggccgtcgtcgaggcgatgctccttgcacgacgggtgtccggttcg
tcgtcgaacgtgttcctggtggacgcggatgccctcccacagaccaaacgtctgctcgca
caccgtgccgaggcggtgggcatccagctccaggagttctccattggcgctgaactcccc
gaagccttcggtggagtcatccagtacccgggtgcttccggtcgtgtcgtcgacccatcg
gccgcgatcgcggccatcaaggagcacggcggtgtcgccgtggtggccgccgacctcctg
gccctcaccctcctcgcctccccgggtgacctgggggcggacgtcgccgtcggaacctcg
cagcggttcggtgtgccgatgggattcggcggcccgcacgctggattcatggcggtgcgc
tcagggctcgaacgccagttgccgggtcgcctcgtcggagtatcccaggacgcgtctggc
cagcccgcgtaccgcctgtcgttgcaagcgcgggagcagcacatccgccgtgagaaggcg
acatcgaacatctgcaccgcgcaggtgctcctcgccgtgatggcgtcaatgtacgcggtc
taccacgggccggacgggctgaagcggatcgcccagcacgtgcacggcgcggccgtcctc
gccgccaaggagctgaaggcccgcgggctcgagctcgtccacgcgcacttcttcgacacc
ctcgccgtgcgggtgacggatgccgcggccgtcgtcaccgcggcgggtgaacgtggcatc
cttctcaccgccatcgacgacgcgacggtgtcgctcgcgttcgacgaggtctcggccgac
gatctggccgaggtgctgccagccctcctcgagtctctcgcgccgggtgtggaacgcgga
ccgctggacggggagggggtcttcgcgcccgacgaggagcgctggttcgcattctcgccg
ctcaccgcccacgagtacccgccggagcttgcccggtcgagcccgtacctcacccacccc
gtgttctcgacgcaccgtagcgagacgtcgatgatgcgctacctcaagtacctcgccgac
aaggattacgccctcgaccgcggcatgatccccctcggctcgtgcacgatgaaactcaat
gcggcgaccgagatggcctccattacgtggccggagttcgcgaacatccacccgttcgct
cccgacagcgacaccgaggggtaccgcgaactcgtcggtgagttggaggactggcttgcc
gaggtaacgggctacgacgcggtctcgctgcagccgaacgcgggaagtcagggtgaactc
gcggggcttctcgcgatccgcggctaccaccgctcccgaggcgacaaccagcgcacggtg
tgcctcatcccgtcgagtgcccacggcacgaacgccgcgagtgccgtcctcgccggaatg
cgggttgttgttgtcgcgtgcgacgacctcggcaatgtcgacctcgacgacctccgtgcc
aagatcgcccagcacgccgacgagctcgccgccctcatgatcacctacccgtcgacccac
ggggtgtacgagcacgacgtgctcgacatcacggccgctgtccacgaggccgggggacag
gtgtacgtcgacggcgccaacctcaacgctctcctcggttacgcgcgcttcggtgacttc
ggcggggacgtctcgcacctcaacctgcacaagacgttctgcatcccacacgggggtggc
gggccgggtgtcggtcccgtggccgcgaaagcgcacctggcggagttcctgccgcgaggc
agcgaaaatcccgtcagctctgcgccgtacgggagtgcgggcatcctgccgatctcctgg
gcctacgtgcggatgatgggcacggagggtctcacgaaggcgacgggtgccgcggtgctc
gcggccaactacgtggcggtgcgtctgcgggaccacttcccggtgttgtactcgggcgat
aacggactcgtggcgcacgagtgcatcctcgacctgcgtccgctcaaggctgcgacgggg
atcgacaacaacgatgtcgccaagcggctcatcgactacgggttccacgcgccgaccatg
tcgttcccggtggcgggcacgctcatggtcgaaccgaccgaaagcgaggacctcgccgag
atcgaccgcttcatcgatgcgatgatcgcgatcaaggaggaggcggatgccgtggccgcc
ggcgtgtggccggcaaacgacaacccgctcgtgaactcgccgcacaccgcggtgtcggtg
atcgagggggagtggcagcacgcctattcgcgggagctggccgtgtatccgctgcgcagc
atcatccgtcagaagtattggcctcccgtgcgccgcgtcgacaacgcctacggtgaccgc
aacctcatgtgtgcgtgcccgccgatcgaggccttcgcctaa
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