Antiquaquibacter oligotrophicus: LH407_04405
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Entry
LH407_04405 CDS
T09620
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aog
Antiquaquibacter oligotrophicus
Pathway
aog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LH407_04405 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aog03019
]
LH407_04405 (groL)
03110 Chaperones and folding catalysts [BR:
aog03110
]
LH407_04405 (groL)
03029 Mitochondrial biogenesis [BR:
aog03029
]
LH407_04405 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aog04147
]
LH407_04405 (groL)
Enzymes [BR:
aog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LH407_04405 (groL)
Messenger RNA biogenesis [BR:
aog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LH407_04405 (groL)
Chaperones and folding catalysts [BR:
aog03110
]
Heat shock proteins
HSP60 / Chaperonin
LH407_04405 (groL)
Mitochondrial biogenesis [BR:
aog03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LH407_04405 (groL)
Exosome [BR:
aog04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LH407_04405 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LH407_04405 (groL)
Exosomal proteins of breast cancer cells
LH407_04405 (groL)
Exosomal proteins of colorectal cancer cells
LH407_04405 (groL)
Exosomal proteins of bladder cancer cells
LH407_04405 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
bHLH_NPAS4
Motif
Other DBs
NCBI-ProteinID:
UDF14105
LinkDB
All DBs
Position
complement(893101..894732)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNTLADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPYEKIGAELVKEVAKKTDDVAGDGTTTSVVLAQALVREGLRNVAAGADPISLKRGIE
KATNAVIESLVSSAKEIETKEEIAATASISAADNEIGALIAEAIDKVGKEGVVTVEESNT
FGTELELTEGMRFDKGFLSAYFVTDQERQEAVFEDPYILIVNSKISNIKDLLPIVDKVIQ
SGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKAPGFGDRRKAQLADIAILTGGQVIS
EEVGLKLENATLDLLGRARKVVITKDETTIVEGAGDPDAIAGRVKQIRAEIENTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GKTAFESAAITGLSGDEATGANIVKVAVDAPLKQIALNAGLEPGVVVDKVRNLPVGQGLN
AATGEYVDMLAAGINDPVKVTRSALQNAASIAGLFLTTEAVVADKPEKTPAMPMGDPSGG
MDF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatcattgctttcgatgaggaggcccgccgcggcctcgagcgcggcctgaac
acgctggccgacgccgtcaaggtcacgctcggcccgcgcggacgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggcgtctcgatcgccaaggagatcgaa
ctcgacgacccgtacgagaagatcggtgcggagctcgtcaaggaggtcgcaaagaagacg
gatgacgtcgccggtgacggtacgaccacctccgttgtcctcgctcaggcactcgtgcgc
gagggtctccgcaacgtcgcagcgggcgccgaccccatcagcctcaagcgcggcatcgag
aaggcgaccaacgccgtcatcgagtcgctcgtctcgagcgccaaggagatcgagaccaag
gaagagatcgccgctaccgcgtcgatttcggctgcagacaacgagatcggtgcgctcatc
gcagaggcgatcgacaaggtcggcaaggagggtgtcgtcaccgtcgaggagtcgaacacg
ttcggcaccgagctcgagctcaccgagggtatgcgcttcgacaagggcttcctgtcggcg
tacttcgtcaccgaccaggagcgccaggaggcggtcttcgaggacccgtacatcctcatc
gtcaacagcaagatctccaacatcaaggatctgcttcccatcgtcgacaaggtgatccag
agcggcaagcagctgctcatcatcgccgaggacgtcgacggtgaggcgctcgcgactctc
gtcgtgaacaagatccgtggcatcttcaagtcggttgccgtcaaggctcccggcttcggt
gaccgtcgcaaggctcagctcgccgacatcgccatcctcaccggtggccaggtcatctcc
gaggaggtcggtctcaagcttgagaacgccaccctcgacctgctcggccgtgcccgcaag
gttgtcatcaccaaggacgagaccacaatcgtcgagggtgccggtgaccccgacgccatc
gcgggtcgcgtgaagcagatccgtgccgagatcgagaacaccgacagcgattacgaccgc
gagaagctccaggagcgcctcgcgaagctcgccggcggtgttgcggtcatcaaggccggt
gccgcgaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggcagccgtcgaggagggcatcgtcgccggtggtggcgttgcgctcatccaggcc
ggcaagacggctttcgagtctgcagcgatcaccggcctgtccggtgacgaggccacgggc
gcgaacattgtcaaggtcgccgtggatgccccgctcaagcagatcgccctcaacgccggt
ctcgagccgggcgttgtggtcgacaaggtgcgcaaccttcccgtcggtcagggcctcaac
gccgcgaccggtgagtacgtcgacatgctcgccgcaggtatcaacgacccggtaaaggtc
acgcgctccgcgctgcagaacgcagcgtcgatcgccggcctcttcctcaccaccgaggcc
gtcgtcgccgacaagccggagaagaccccggccatgccgatgggtgacccctcgggtggc
atggacttttag
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