Antiquaquibacter oligotrophicus: LH407_05425
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Entry
LH407_05425 CDS
T09620
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aog
Antiquaquibacter oligotrophicus
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aog03016
]
LH407_05425 (truA)
Enzymes [BR:
aog01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LH407_05425 (truA)
Transfer RNA biogenesis [BR:
aog03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LH407_05425 (truA)
Prokaryotic type
LH407_05425 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UDF14680
LinkDB
All DBs
Position
complement(1097640..1098533)
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AA seq
297 aa
AA seq
DB search
MDESRIRMRLDLAYDGTGFAGWAKQPGLRTVQGVLEEALATVLRDDNPPVLTVAGRTDAG
VHATGQVAHLDLTPEQLRSLAKPHGGRPAPDPGSALVRRINGIAGLRSDVVLTRAALAPD
GFDARFSPVWRRYEYRIADSLAARNPLHRLFTTWYPSALDVDAMNVASDELVGLHDWAAY
CKPRAGSTTIRELQEFRWVRGADGVITAHLKADAFCHSMVRALVGAGVALGEGKLASDRM
VGIRREQQRTSEFKVMPAQGLTLVEVGYPEDADLAARAERTRARRDDEAFDQGTPIT
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcccgtatccgcatgcggctcgacctggcctacgacggcacgggattcgcg
ggctgggcgaagcagcctggcctgcgcacggtgcaaggtgtgctggaggaggcgctcgcg
accgttctccgcgacgacaacccgcctgtgctcaccgtcgcgggacgcacggatgccggg
gttcacgccacgggtcaggtggcgcacctcgacctcaccccggaacagctccgctctctc
gcgaagccccacggcggtagaccggcgccggatcccggttccgccctggtacgtcgcatc
aacggcatcgcggggctccggtccgatgtggttctcacccgcgcggcgctggcgccggac
gggttcgacgcgaggttctccccggtgtggcgacgttacgagtaccgcatcgcggattcc
ctcgcagcccgcaatccgctgcaccgtctgttcacgacgtggtacccgtccgctctcgac
gtcgacgcgatgaacgtggcatccgatgagctggtggggcttcacgactgggcggcctac
tgcaagcctcgcgcggggtcgacgaccattcgggagctgcaggagttccgttgggttcgc
ggagccgatggggtgatcacggcgcacctgaaggccgatgcgttctgccacagcatggtg
cgtgcgctcgtgggtgccggtgtcgccttgggggagggcaagcttgcgagcgacaggatg
gtgggcatccgtcgggagcagcaacgcacgagcgagttcaaggtcatgccggcccagggc
ctcacgctcgtcgaggtcggctatccggaggacgccgacctggcggcccgtgccgagcgc
acacgtgcacgtcgtgacgacgaggcgtttgaccagggcacaccgatcacctaa
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