Antiquaquibacter oligotrophicus: LH407_05870
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Entry
LH407_05870 CDS
T09620
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
aog
Antiquaquibacter oligotrophicus
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aog03400
]
LH407_05870 (radA)
DNA repair and recombination proteins [BR:
aog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LH407_05870 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
AAA_22
DUF7125
DnaB_C
ChlI
AAA
AAA_16
nSTAND_NTPase5
Lon_C
AAA_5
AAA_30
nSTAND3
ATPase_2
NTPase_1
IstB_IS21
AAA_18
AAA_14
DAP3
AAA_24
AAA_19
AAA_29
NACHT
RecA_N
ABC_tran
MCM
Hpr_kinase_C
SLFN-g3_helicase
AAA_10
RsgA_GTPase
ArsA_ATPase
CbiA
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UDF14388
LinkDB
All DBs
Position
1184122..1185462
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AA seq
446 aa
AA seq
DB search
MARVTSNFRCTECGWTSIKWVGRCGECQQWGTVIDQAEPVARVTPLRPVNAARSITEIGA
ESVAHWPSGIAEFDRVLGGGVVPGAAILLSGEPGVGKSTLLLEVASRAAALGQRVLYVSA
EESVSQVRLRAERTGALHPSLYLAAETDLATILGQIDQVSPELVIVDSVQTVASGLTEGL
AGGPAQVREVASTLIRVSKDRNLPILLVGHVTKDGTIAGPRLLEHLVDVVLQFEGDRQTS
LRFVRAHKNRFGPTDEVGCFEMTGDGIAEVPDPSGLFLSRARVPTSGTCVTIAVEGRRAL
PVEIQALIVESKAPQPRRVVNGVDSSRVAMVLAVLERRLKMALSGFDVYVSTVGGIRVVE
PAADLAIALAIASAFRDKAFAVTQAAVGEISLAGEIRPVAQAGQRATEARRLGFSTMIDA
ESAHIREAMRLAFAASVDERGDIPEF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtcacgtcgaactttcgctgcacagagtgcgggtggacgagcatcaaatgg
gttggccgctgcggcgaatgccagcagtggggcaccgtcatcgatcaagccgagccggtc
gcgcgcgtgacacctctgcgccccgtgaacgcggcccggtcgatcaccgagatcggtgcc
gaaagtgtcgcccactggccgagcggcatcgccgagttcgaccgtgtgctcggtggtggc
gttgttccgggtgccgcgatcctgctctcgggagagcccggcgtcggtaagtcgactctc
ctgctcgaggttgccagtcgcgccgctgcgctcggccagcgtgtgctctacgtgagcgcc
gaggagtcggtaagccaagtgcgtctccgcgccgagcgcacgggggcgttgcatccgtcg
ctctacctcgccgccgagaccgacctcgcgacgatcctcgggcagatcgaccaggtctcc
cccgaactcgtcatcgtcgacagcgtgcagaccgtcgcatccggactcaccgagggcctc
gccggcggaccagcccaagtgcgcgaagtcgcgtcgaccctcattcgcgtgagcaaggac
cgcaacctgccgatcctcctcgtcggccacgtcaccaaagacggcaccatcgcaggcccc
cgcctgctcgagcaccttgtggacgtggtgctgcagttcgagggcgaccggcagacgagc
cttcgtttcgtgcgcgcccacaagaaccgctttggccccaccgacgaggtcggatgcttc
gagatgacaggcgacggcatcgccgaggtacctgacccctccggcctgttcctctcccgc
gcgcgtgtgcccacgagcggaacgtgcgtgaccatcgccgttgaggggcgtcgggcgttg
cccgtggagatccaggcactcatcgtcgagtccaaagctccgcagccgcggcgcgtggtc
aacggggtcgactcgtcgcgtgtggcaatggtgctggccgtgctcgagcgccgcctcaag
atggccctctctgggttcgacgtgtacgtctccactgttggcggcatcagagtggtcgag
cccgcggccgacctcgccatcgcattagccatcgcgagcgccttccgtgacaaagcattc
gccgtcacccaggccgccgtcggagagatcagcctcgcgggcgaaatccggccggtggcc
caggccggtcagcgcgcgacagaagcgcgacgactcggcttcagcacgatgatcgacgca
gagtcggcacacattcgcgaggcgatgaggctcgccttcgcggcatccgtcgacgaacgg
ggcgacattcccgagttctga
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