Antiquaquibacter oligotrophicus: LH407_06955
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Entry
LH407_06955 CDS
T09620
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
aog
Antiquaquibacter oligotrophicus
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aog03032
]
LH407_06955
03036 Chromosome and associated proteins [BR:
aog03036
]
LH407_06955
03400 DNA repair and recombination proteins [BR:
aog03400
]
LH407_06955
DNA replication proteins [BR:
aog03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LH407_06955
Chromosome and associated proteins [BR:
aog03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LH407_06955
DNA repair and recombination proteins [BR:
aog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LH407_06955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
RAB3GAP2_N
Motif
Other DBs
NCBI-ProteinID:
UDF14593
LinkDB
All DBs
Position
complement(1387457..1387744)
Genome browser
AA seq
95 aa
AA seq
DB search
MADKSLNRTEFVAAVAAESGQSQAAVNTVLDSIFSVLSSSVADGTKVSIPGWISVERTAR
AARAGRNPQTGEAIQIAASNGVKISAGSKLKAAVK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagtcactaaaccgtaccgagttcgtcgccgcagtcgccgccgagtctggc
cagagccaggccgccgtcaacacggttctcgactcgatcttctccgtgctctccagctcg
gtggcagacggcaccaaggtttccatccccggatggatctccgtcgagcgcaccgcccgt
gccgcccgcgccggccgcaacccgcagacgggtgaggccatccagatcgcggcgagcaac
ggcgtgaagatcagcgccggaagcaagctcaaggcagccgtcaagtaa
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