Antiquaquibacter oligotrophicus: LH407_09745
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Entry
LH407_09745 CDS
T09620
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
aog
Antiquaquibacter oligotrophicus
Pathway
aog03030
DNA replication
aog03430
Mismatch repair
aog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH407_09745
03430 Mismatch repair
LH407_09745
03440 Homologous recombination
LH407_09745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aog03032
]
LH407_09745
03400 DNA repair and recombination proteins [BR:
aog03400
]
LH407_09745
Enzymes [BR:
aog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH407_09745
DNA replication proteins [BR:
aog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LH407_09745
DNA repair and recombination proteins [BR:
aog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LH407_09745
BRITE hierarchy
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
Rad17
AAA_14
AAA_30
DnaX_C
T2SSE
AAA_19
nSTAND3
AAA_28
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UDF14706
LinkDB
All DBs
Position
2002850..2005174
Genome browser
AA seq
774 aa
AA seq
DB search
MPGDTVTGGDYSGYVVAALYRRYRPETFAELIGQSQVTDPLRTALRTDRVNHAYLFSGPR
GCGKTTSARILARCLNCAEGPTDTPCGVCPSCIELSRDGAGSLDVVEIDAASHNGVDDAR
DLRERAVFAPARDRFKIFILDEAHMVTPQGFNALLKIVEEPPEHVKFIFATTEPEKVIGT
IRSRTHHYPFRLVPPAQLLDYVQELCDSEGVSVDAGVLPLVVRAGGGSVRDTLSLLDQLI
AGSEGDTIEYERAVALLGYTHGELLDEVVDAIGARDAASVFASLDRVIQTGQDPRRFVED
LLERLRDLIIVAATRGNAQAVLRGIPQDQLDRMSAQAQAFGSAELSRAADVVNAALTEMT
GATSPRLHLELMAARILVPSSDDTERGALARVERLERRIGVDGGAAQAPAAAAAQPSAAA
AVPHRGDSPATPSADEQQAAPAENLRDAAPDSATPAGTAPAETAGASEPAPDTAGRGAAQ
QRLESEPPSEPDGGSVGAGVAESLRDSPSSSVPVSIQQVKDAWPEILDVIERAKRTAWMV
VATAKPLELRDGNVLVLSFPSQNDVAALKQQSAPGEGVGDHLKKAMVQVLGIEPLLIARV
SESARPDAQADPPQSAPAPAAPAQGSTGWAVAQIPTSSAPTSLPEHTRTAAAPDTSAPAT
PTPATSAPAGTAKQAAPAGTAKQAAPAAPGQAPAAPAQQSTPPSDPGAPAQPEPPAEPEP
PAAPEPPAAPAAPASASAKPKPTKYGEAVVRDLLGATFIEEQTITPRVAPRPEP
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgataccgtcaccggcggcgactactctgggtacgtggttgccgccctgtac
cgccgttaccggccagagacgttcgccgagctcatcggccagtcgcaggtgaccgatccg
ctccgcacggcgctgcgaaccgatcgcgtcaaccacgcgtacctcttctccggcccccgt
ggttgcggtaagacgacgagcgcccgtattctcgcgcgctgcctcaactgcgccgagggc
cccaccgacaccccgtgcggcgtgtgcccgagctgcatcgagctgagccgcgacggcgca
ggcagcctcgacgtggtggagatcgacgcggcatcccacaacggtgtcgacgacgcccgc
gacctgcgagagcgcgccgttttcgctcccgcccgcgaccgcttcaagatcttcatcctc
gatgaggcccacatggtcacaccgcagggcttcaacgcgctgctgaaaatcgtcgaggag
ccgccggagcacgtcaagttcatcttcgcgaccaccgagcccgagaaggtcatcggcacg
atccgcagtcgcacccaccactacccgttccgcttggtgccgccggcgcagctgctcgat
tatgtgcaggagctgtgcgacagcgagggtgtgtccgtggatgccggggtgctgcccctg
gtggtgcgcgctggtggtggctccgtgcgtgacaccctctcgctgctggaccagctcatc
gcaggcagcgagggcgacaccatcgagtacgagcgtgcggtggcgctgctcgggtacacc
cacggcgagctgctggacgaggtggtcgatgcgatcggcgcccgggacgcggcatccgtg
ttcgcgtcgctggatcgcgtgatccagaccggccaggacccgcgacgtttcgtcgaggac
cttctcgagcggctgcgcgacctcatcatcgtggcggcgacgcgcggtaatgcgcaggcg
gtgctgcgcggcatcccgcaggaccagctcgaccgcatgtccgcccaggcgcaggcgttc
ggctcggcggagctgtcgcgggcggcggatgttgtcaacgctgccctcacggagatgacg
ggtgccacgagcccccgcctccacctcgaactgatggccgcgcgcatcctcgtgccctcg
agcgacgacaccgagcggggtgccctcgcccgtgtggagcgtctcgagcgccgcatcggc
gtggatgggggagcggcgcaggccccggccgctgccgccgcgcagccgtcggccgctgcc
gccgtgccgcatcgcggagattctcccgccacgccgtccgcagacgagcaacaggccgca
cccgccgagaacctccgcgacgcggcccccgacagcgccacccccgcgggtaccgccccc
gcggaaaccgccggagcctcggagcctgcccctgataccgctggtcgaggagctgcgcag
cagcgtctcgagagcgagcccccgagcgagcccgacgggggctccgtcggcgctggcgtc
gcggaatcgctgcgcgattctccaagctccagcgtccccgtctccatccagcaggtgaag
gacgcgtggcccgagattctcgacgtcatcgagcgcgccaaacgcaccgcgtggatggtg
gtcgccaccgcgaagcccctcgagctgcgggacggcaacgtgctcgtgctgtcgttcccc
agccaaaacgatgtggctgccctcaagcagcagtccgcccccggcgagggtgtcggcgat
cacctcaagaaggcgatggtgcaggtgctcggcatcgagccgctgctcattgcccgcgtg
tccgagtcggcgcgcccggatgcccaagccgaccccccgcagagcgcccctgcaccggcg
gctccagcccagggctccactggctgggcggtcgcgcagatccccacatcgtctgccccc
acgtcgctccccgagcacactcgcaccgcggcagcacccgacacttcagctccggcgacc
cccacccccgcgacctccgcgcccgctggcaccgcgaagcaggctgcgcccgctggcacc
gcgaagcaggctgcgcccgccgcccccgggcaggcgcccgctgcccccgcgcagcagtcc
acgcccccgagtgaccccggcgcccccgcgcagccggagccccccgcagaaccggagccc
cctgcagcgcccgagccgccggcggctcccgcggcgccggcgtcggcatccgccaaaccg
aagccgaccaagtatggcgaggcggtggtgcgcgacctgctcggcgcgaccttcatcgag
gagcagacgatcaccccgcgcgtggcgccgaggcccgagccgtga
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