Antiquaquibacter oligotrophicus: LH407_10550
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Entry
LH407_10550 CDS
T09620
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
aog
Antiquaquibacter oligotrophicus
Pathway
aog00521
Streptomycin biosynthesis
aog00523
Polyketide sugar unit biosynthesis
aog00525
Acarbose and validamycin biosynthesis
aog00541
Biosynthesis of various nucleotide sugars
aog01100
Metabolic pathways
aog01110
Biosynthesis of secondary metabolites
aog01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LH407_10550 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LH407_10550 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LH407_10550 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LH407_10550 (rfbB)
00525 Acarbose and validamycin biosynthesis
LH407_10550 (rfbB)
Enzymes [BR:
aog01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LH407_10550 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
NmrA
adh_short
SelO
Motif
Other DBs
NCBI-ProteinID:
UDF12589
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All DBs
Position
complement(2170347..2171330)
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AA seq
327 aa
AA seq
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MKILVTGGAGFIGSNFVRRTLQDAYPGLEGADVVVYDALTYSGNLENLAPVADSPRYSFV
QGDIRDAELLDATLPGVDAIVHFAAESHVDRSVRDSGIFVETNVLGTQRLLDAALRNGTP
RFVHVSTDEVYGSIAEGSWDETRPLEPNSPYSASKAGSDLLARSYFRTHGLNLSITRCSN
NYGPYHFPEKVIPLFVTNLIDDKHVPLYGEGNNIRDWLHVDDHTRGIAMVLTRGRAGEIY
NIGGGTELTNKELTEMLLEATGKDWSYVDRVADRLGHDLRYSVDISKIQAELGYEPQVPF
EQGLADVVQWYRDNRAWWEPLKARAAL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcgtcaccggcggcgccggtttcatcggctccaacttcgtccgccgtacc
cttcaggacgcctaccccggcctcgagggagccgacgtcgtcgtctacgacgcactcacc
tactccggcaacctggagaacctcgcgcccgtcgccgactccccccgttactcgtttgtg
cagggcgacatccgcgacgcagagctgctggatgccacgctccccggcgtcgacgcgatc
gtgcacttcgccgcggaatcccacgtcgaccgctccgtgcgcgactccggcatcttcgtc
gagaccaacgtgctcggcacccagcgcctcctcgatgctgcgctgcgcaacggcaccccg
cgttttgtccacgtctcgaccgacgaggtctacggctcgatcgccgagggctcgtgggac
gagacccgcccgctcgaaccgaactccccctactcggcgtcgaaggccggtagcgacctc
ctcgcccgcagctacttccgcacgcacggactgaacctctcgatcacccgctgctcgaac
aactacggcccctaccacttcccggagaaggtcatcccgctgttcgtcacgaacctcatc
gacgacaagcacgttccgctctacggcgagggcaacaacatccgcgactggctgcacgtc
gacgaccacacccgcggcatcgccatggtgctcactcgcggtcgcgccggcgagatctac
aacatcggcggtggcaccgagctcaccaacaaggagctcaccgagatgcttctcgaggca
acggggaaggactggtcgtacgtcgaccgcgtggccgaccgtctcggtcacgacctgcgc
tactcggtagacatctccaagatccaggccgagctcggctacgagccgcaggtgccgttc
gagcagggcctcgccgacgtcgtgcagtggtaccgcgacaaccgcgcgtggtgggagccc
ctcaaggcccgcgccgcgctctga
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