Antiquaquibacter oligotrophicus: LH407_14055
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Entry
LH407_14055 CDS
T09620
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
aog
Antiquaquibacter oligotrophicus
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aog03032
]
LH407_14055
03400 DNA repair and recombination proteins [BR:
aog03400
]
LH407_14055
Enzymes [BR:
aog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LH407_14055
DNA replication proteins [BR:
aog03032
]
Prokaryotic type
DNA Topoisomerases
LH407_14055
DNA repair and recombination proteins [BR:
aog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LH407_14055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF2486
Motif
Other DBs
NCBI-ProteinID:
UDF13263
LinkDB
All DBs
Position
complement(2867260..2869731)
Genome browser
AA seq
823 aa
AA seq
DB search
MATRDNPPTVVPAGERIEDVDVSAEMQGSFLEYAYSVIHSRALPDARDGLKPVQRRILFQ
MTEMGLRPDRGHVKSSRVVGDVMGKLHPHGDAPIYDAMVRLAQDFVMRVPLIDGHGNFGS
LDDGPAAPRYTEARLQAAALALTDNLDEDVVDFVPNYDNSFQQPGVLPAAFPNLLVNGAS
GIAVGMATNMAPHNLIEVVGAARHLLENPDATLDELMSFVPGPDLPSGGTIIGLEGIKDA
YATGRGAFKTRARVSIEPITARKTGLIVTELPYLVGTERVIEKIKDGVNAKKINGISDVT
DLTDRKHGMRLVIGIKTGFSPDAVLEQLYRLTPLEDSFSINNVALVEGQPRTLGLKDLLT
VYIEHRLDVVRRRSEYRLARRLERLHLVEGLLVAILDIDEVIQVIRSSDDGEQAKSRLID
VFDLSELQADYILELRLRRLTRFSRIELEAERDRLRTEIAELQAILADPARIRALVSAEL
DEVAEKFGTPRRTLLTEARPSVATSSARKNAPVLEIVDAPCEVLLSTTGRAIRVDIGEEP
VTAVARRRSKHDAIRSRVVTTTRSEIGAITASGKLVRFTAVDLPSVPANSIQLAAGARIT
DYLALSAKETIVALVPLSSEIPIALGTRQGVVKRVTPGAWPSRPEFEVVSLKPGDDVVGA
ALAPDDRELVFITSSAQLLRFGASTVRPQGLAAGGMAGISLAAGANVIYFGVVDPAVENV
VATVSTSSSTIAGTDAGRAKVSDLSEFPGKGRATGGVRAHAFLKGEDVLGLAWAGPSPAL
AVGTDGAARTLPASGARRDASGTPLDAVVGSIGQALSPETTSG
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggctacccgtgataatccccccacagtcgtgcccgctggcgaacgcatcgaggacgtc
gatgtatcggccgagatgcagggttcgttcctcgaatacgcctattcggtcatccattca
cgcgccctgccggatgcgcgagacggtctgaagccggtccagcgcaggatcctcttccag
atgaccgagatgggcctgcgacccgatcgtggacacgtgaagtcctcgcgcgtcgtcggc
gacgttatgggaaaactgcatccgcacggcgacgcccccatctacgacgccatggtccgc
ctcgcgcaggacttcgtgatgcgtgttccgcttattgacggacacggcaactttggttca
ctggacgacggtccagccgccccgcgctacacagaggcgcggcttcaagcggccgcgctg
gcgctcaccgacaacctcgacgaagatgtcgtcgatttcgttccgaactacgacaactcc
tttcagcagccgggtgtcctgcctgctgccttcccgaacctgctcgtcaatggcgcgtcc
gggattgcggtcggcatggcgacgaacatggcaccccacaacctcatcgaagtagtgggc
gcggcgcgacacctcctcgagaatccggatgccacgctcgacgaactcatgagcttcgtg
ccgggaccggacctgccttccggcggcacgatcatcggcctcgagggaatcaaggacgcc
tacgcaacgggtcgcggagcgttcaaaacgcgagctcgcgtgtccatcgaaccgattacg
gctcggaagacgggactcatcgtcaccgagcttccgtatctcgtcggcaccgaacgagtg
atcgaaaaaatcaaggacggcgtcaacgccaagaagatcaacggcatctccgacgtcacc
gatctcacggaccgcaaacacggtatgcggctggtcatcggcatcaagacgggtttcagc
cccgatgccgtcctggaacagctgtatcgactcaccccactcgaagacagcttttcgatc
aacaacgtcgcactggtggagggtcagccccgcacgcttggcctaaaagacctcctcacg
gtctatatcgagcaccgactcgacgttgtgcgtcgccgaagcgagtaccggcttgcacga
cgcctcgaaaggctccacctcgtcgaaggtctcctcgtcgcgatcctggacatcgacgag
gtcattcaagtcatccgctcgagcgacgacggcgagcaagcaaagtcgaggctcatcgat
gtcttcgacctcagtgagctccaggccgactacatccttgaacttcgtttacgccgactg
acgcgctttagccgtatcgaactcgaggcagagcgtgaccgcctgcgcaccgagatcgct
gagcttcaggccatccttgccgaccccgcgaggatccgtgctctcgtatccgcagagctc
gatgaggttgccgagaagttcggcacacctcgacgcacccttctcacggaggcgcgcccc
tccgtcgctacgtcatcggcgcggaagaacgcccccgtgctagagatcgtcgatgcaccg
tgtgaggtgctcctgtcgacgacaggacgagcgattcgcgtcgacatcggtgaagaacct
gtgaccgcggtagcccgccggcgcagcaaacacgacgcgatcagatcacgcgtggtgacg
acaacacgatccgagatcggtgcgatcacggcgagcggcaaactcgtgcgcttcacggcg
gtcgatcttcccagtgtgcccgccaactcgattcagctcgccgcgggcgctcgcatcacc
gactacctcgccctcagcgcgaaagagacaatcgtcgcgcttgtcccgctctcatccgag
ataccgattgctcttggcacccggcagggtgtcgtcaagcgggtgaccccgggggcgtgg
ccctcgcggccggagttcgaggtcgtgagcctgaagcccggtgatgatgttgtcggtgcc
gccctcgcccccgacgaccgggaactcgtgttcatcacgtcctccgcacagcttctccgt
ttcggcgcgtcaacggtccgtccgcagggtctcgcggctggagggatggcgggtatttcg
cttgccgccggtgcgaacgtcatctatttcggagtcgtcgatccggcagtcgagaacgtc
gtggccacagtatcgacgtcgtcgtccacgattgcaggcacggatgctggtcgagcgaag
gtttccgacctgtccgagtttcccggcaagggccgcgcaacgggcggcgtgagagcgcac
gccttcctcaagggcgaagatgtgctcggcctcgcctgggcgggtccgtctcccgcactc
gcggtaggaaccgacggtgccgcacgtactctgcccgcgagcggcgctcgacgtgatgca
tccggtacaccactggatgcggttgtgggatcgatcggacaagcgctgagcccggagact
acctcgggctaa
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