Anaplasma ovis: AOV_00280
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Entry
AOV_00280 CDS
T05659
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aoh
Anaplasma ovis
Pathway
aoh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOV_00280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoh03400
]
AOV_00280
Enzymes [BR:
aoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOV_00280
DNA repair and recombination proteins [BR:
aoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
AOV_00280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
Helicase_C
UvrB_inter
CarD_TRCF_RID
ResIII
Cas3-like_C_2
UB2H
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASI48125
UniProt:
A0A2Z2LF05
LinkDB
All DBs
Position
complement(61603..64968)
Genome browser
AA seq
1121 aa
AA seq
DB search
MLMAQMCMEDRHTSFVFVVQESVSLAHLAKTLKFFDRERDVFTLPQWDSIPHKGVSPSNL
VMATRMKCLLNISKTQNPYIVLTTAGAVAQKVLPAHSVASATITIAPGDSLSMNVLVKHL
VACGYTQSSAVREVGSFAVRGEIVDIFQPIDNKPTRIDFCYDAVESIRYFNLDTQITDGD
ALQSLVIYPASEVIKTEENLSLFYTRYMQCPNPDPEFAEAMLSKQKCMGEEQWLPLLQAG
ELSTIFDYVPDAKLVFAEPASEEVLQRLEGAREAGHATQPTAEKSALFLDLQGYTQITKG
FSKAIFCRFDAAPKNNLWEHQQVRCSSSNISAVPNFRLLAQEQKADVFAVATDYINSAHK
TLILACYSEGSLLYFIDKFRAHGIHISRVHEYAGSLDLFNAAVLLTSCSVVTHDFIVITE
YSLLKRQCAAGRSSGTVVSEDTCFAVGDVVVHKDYGIGIFNALRTLSVCGNSHDFVEILY
RNNDKLFVPVEDIDLITKYGTNTDVVLDKLGSTSWQERSAKLKKRIKDIAQTLLRSEAMR
VLAEGSKFLANQRYLDFCKEFPYIETEDQIKAISEVEEDLASGKVMDRLICGDVGFGKTE
VALRAAFLVINEDPTRQVAVIVPTTLLCRQHLAAFRERFQNYDINVQQLSRSSATQKSKV
KKALEDGNINIIIGTSALLAKDIRFLDLSLLIIDEEQHFGVQQKEQLKKLRHDVHVLSLS
ATPIPRTLHMSLSGIKNLSVLRTPPIGRMAVDIAIIQYDGNIIKTAILDEVNRGGRVFFT
CPFISDIDGVLEDLQKLVPDVKVEVAHGRTSTKALDKIMNDFFDGKFSVLLTTSIIESGI
DIPFANTIIVHNADMFGLAQLYQLKGRVGRSTLKGYAYFITSKNALPNSPGIKRLEAVRS
LNSVGSGFALALQDMDMRGFGNLVGEEQSGNIKEVGIELYHKMLEEAIAACQEKPYTPAG
CHSAKVVVDANIRIPESYIRELDLRIRVYKKISSLKTAEEADTCFVELVNRFGAPPPEVM
NLLNVMRIKQLCSTLSIQEVTQVKRHVTFSLSHGAAAHAGMLKHVVDNHDIFTIYDHSVR
MSVPKASQNQILEYILSHLTRMTAAQICGPDSQIVGPSTAQ
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggcccagatgtgcatggaagatcggcatacttcatttgtgtttgttgtgcag
gaaagcgtatccctggcgcatttggcaaaaaccttaaagttttttgaccgggagcgagac
gtgttcaccctgcctcagtgggattcaatcccacacaagggggtctcgcccagcaatctg
gttatggcaaccagaatgaagtgtctgcttaacatttctaagacccaaaacccatacata
gttctgacaaccgcgggtgcagttgcgcagaaagtgctgccagcacattctgtggccagt
gccaccatcaccattgctcctggtgacagtctgtccatgaatgtgctggtaaagcatttg
gtggcatgtggatacacgcaatcttccgcggtacgcgaggtgggaagctttgcagtacgg
ggagaaatcgtcgatattttccagccgatagataacaaacctaccagaatagacttctgt
tacgatgctgttgagtctatcagatatttcaaccttgatacacaaattacagatggggac
gcgctacaaagtttggtcatctacccagcatctgaagtaataaaaaccgaagaaaacctg
agtctgttttacacgagatacatgcagtgtccaaaccccgacccagaatttgccgaggcc
atgctttccaagcaaaaatgtatgggggaagagcagtggctacctttgttacaggcaggt
gagttgtcaaccatttttgactacgtcccagacgcaaaactagtgtttgcagagccagct
tcagaagaagtattgcagcgcttggaaggcgcacgagaagcaggtcatgcaacacaacct
acagccgagaaaagcgctttgtttttggatttacagggttacacgcaaattacaaaaggc
tttagcaaggccatattctgccgttttgatgcggcaccaaaaaacaacctatgggagcac
caacaggtcagatgctcttctagcaatatcagcgctgtgccaaatttcaggttgctagca
caagaacaaaaggctgatgtattcgcggtggccactgattacattaactccgcacataag
actctaatcctcgcctgttattctgaaggatcactgctatatttcatagataagtttaga
gcgcatggcatacacatatccagagtgcatgagtatgcaggttctctagacttgttcaac
gcggccgtgctactaacaagttgcagtgttgtaacccacgattttatcgtgatcacagag
tacagcctgctgaaacgccagtgtgctgccggtcgctcctctggcacggtagtcagcgaa
gacacctgctttgcggtaggagatgtggtagtacacaaggactacggcattggcatattt
aatgcgctacgcacgctcagtgtgtgcggaaactcacacgattttgttgagatcctctac
cgcaataatgacaaactcttcgtgccggtagaagatatagacttgatcacaaagtacggt
actaataccgacgtcgtcttggataaactcggcagcacctcatggcaggaacgcagcgcc
aaactcaagaaacgtattaaagacattgctcaaacgttgttacgctcagaagctatgcgc
gtactcgcggagggcagcaagtttctcgcgaatcaaaggtacttggatttttgtaaagag
tttccgtacatagaaaccgaagaccagatcaaagcgatatcagaagttgaagaggatctc
gccagcggcaaggtgatggatagactcatatgtggcgacgtgggatttggaaaaacagaa
gtcgcgctgcgcgcggcatttttagtcataaacgaagatccaaccaggcaggttgccgtg
atagtccctacgaccctgctatgcaggcaacatcttgcagcatttagagagagatttcaa
aactacgacatcaatgttcaacaactttcacgatcatccgccacgcaaaagtctaaggta
aaaaaggcgctggaggacgggaacatcaatataatcataggtacaagtgcgcttcttgca
aaagatataagatttttagacttaagcttgctaattatcgatgaggaacaacatttcggc
gtacaacagaaagaacaactaaaaaagctcagacacgacgtgcacgtgctatccttatct
gcaacaccaattcccagaacactgcacatgtcactctccgggataaagaacttgagcgtt
ttgaggaccccacccatagggaggatggccgtggatattgccatcatacagtacgatggc
aatataatcaaaaccgcaattctagacgaggtcaaccgaggcggcagagtgtttttcacc
tgcccgtttatttccgacatcgacggcgtgctagaagatctacaaaaattggtcccagat
gtgaaggttgaggtagcgcatggcagaacatctaccaaggcgttggacaagattatgaat
gactttttcgatggaaagttttccgtccttctgacaacatccatcatcgaaagtggcata
gacatacccttcgccaacaccataatagtacacaatgcggacatgttcggcttggcacag
ctgtatcagctcaagggaagagtgggtcggagcaccttaaagggttacgcctacttcata
acgtcaaagaatgcgttgcccaactcacccggcataaaaaggctagaagcggtaaggtcc
ctaaatagcgttgggtcgggctttgccttagccctacaagatatggatatgcgcggcttt
ggaaatcttgtaggggaggagcagtctggcaacataaaggaagttgggattgagctgtat
cataaaatgctggaagaagccatagccgcgtgccaggagaaaccatacacacctgcgggt
tgtcacagcgcaaaagtagtcgtagatgcgaatatcaggattcctgagtcttatatcagg
gagctagacctgcgcataagggtgtataaaaaaatcagtagcttgaaaaccgcggaggaa
gcagatacctgctttgtcgaactagtaaacagattcggcgcaccaccaccagaggttatg
aatttgctgaatgtaatgcgcatcaaacagctttgctctacactcagcatacaagaggtc
acacaggtgaagcggcacgtcacattttcgctgtcgcacggtgcagcagcgcatgcggga
atgttgaaacatgtagtagacaaccacgatatttttacgatatacgaccacagcgtcagg
atgtcagtgcccaaggcatcgcagaatcaaatactggaatacatattgtcccacctcacg
cgtatgactgctgcacaaatctgcggccccgatagccagattgtagggccttccacagca
cagtga
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