Amycolatopsis keratiniphila: AORI_0688
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Entry
AORI_0688 CDS
T02678
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aoi
Amycolatopsis keratiniphila
Pathway
aoi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aoi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AORI_0688 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoi03021
]
AORI_0688 (rpoA)
03400 DNA repair and recombination proteins [BR:
aoi03400
]
AORI_0688 (rpoA)
Enzymes [BR:
aoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AORI_0688 (rpoA)
Transcription machinery [BR:
aoi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AORI_0688 (rpoA)
DNA repair and recombination proteins [BR:
aoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AORI_0688 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AGM03277
UniProt:
R4SX00
LinkDB
All DBs
Position
697394..698467
Genome browser
AA seq
357 aa
AA seq
DB search
MLISQRPALGEETVNETRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKELVVSSEEDEPVTMYLRKQGPGEVTAADIVPPAGVTVHN
PDLHIASLNGKGKLEIELVVERGRGYVPALQNKQAGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLILDVETKPSITPRDAVASAGKTLVELFGLARELNVDAEGIEIGPSPQE
ADTIAAYAMPIEDLDLTVRSYNCLKREGIHTVGELVSRSEADLLDIRNFGAKSIDEVKLK
LVGLGLALKDSPPGFDPTAAAASYDGEGWSEGVDSITDGISDNGHDDGQDYAETEQL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttcccagcgaccggctctcggcgaagagacggtcaacgagacccgctcccgg
ttcaccatcgaaccgctggagcccggcttcggctacacgctcggcaactcgctgcggcgc
acgctgctgtcgtccattccgggcgcggccgtgacgagcatccgcatcgacggcgtgctg
cacgagttcaccaccgttcccggggtgaaggaagacgtcaccgacatcatcctgaacctc
aaggagctcgtggtctcctcggaagaggacgagccggtcaccatgtacctgcgcaagcag
ggccccggtgaggtcaccgccgccgacatcgtgcccccggccggtgtcaccgtgcacaac
ccggatctgcacatcgcgtcgctgaacggcaagggcaagctcgagatcgagctcgtcgtc
gagcgcggccgcggttacgttccggccctgcagaacaagcaggcgggcgcggagatcggc
cggatcccggtcgactccatctactccccggtgctgaaggtgacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctggacgtggagacgaagccg
tcgatcacgccgcgggacgctgtcgcgtcggccggtaagacgctggtggagctgttcggt
ctcgcgcgcgagctgaacgtcgacgccgaaggcatcgagatcggcccgtcgccgcaggag
gcggacaccatcgccgcctacgcgatgccgatcgaggacctggacctcaccgtccggtcg
tacaactgcctcaagcgcgagggcatccacaccgtcggcgaactggtctcgcgcagcgag
gccgacctgctggacatccgcaacttcggtgcgaagtcgatcgacgaggtcaagctcaag
ctcgtcggtctcggcctcgcgctgaaggacagcccgcccgggtttgacccgaccgcggcc
gcggccagctacgacggtgaaggctggtccgagggcgtcgacagcatcacggacggaatt
tcggacaacggccacgacgatggccaggactacgcagagacggagcagctgtaa
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integrated database retrieval system
