Amycolatopsis keratiniphila: AORI_0791
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Entry
AORI_0791 CDS
T02678
Symbol
uvrD
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aoi
Amycolatopsis keratiniphila
Pathway
aoi03420
Nucleotide excision repair
aoi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AORI_0791 (uvrD)
03430 Mismatch repair
AORI_0791 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoi03400
]
AORI_0791 (uvrD)
Enzymes [BR:
aoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AORI_0791 (uvrD)
DNA repair and recombination proteins [BR:
aoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AORI_0791 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AORI_0791 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Terminase_6N
AAA_22
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AGM03380
UniProt:
R4SKU4
LinkDB
All DBs
Position
806522..808930
Genome browser
AA seq
802 aa
AA seq
DB search
MNTLFDLPADGPAKPRHSDLLDDLNPAQREAVTHAGSPLLVVAGAGSGKTRVLTRRIAYL
LAERDVHPGQIMAITFTNKAAAEMRERVSDLVGRRANAMWVSTFHSMCVRILRREAKTLE
MSSSFSIYDSDDTKRLITLVARDLDIDPKKYAARTLAVHISNLKNELIDPETAVADAGND
LERRVAEVYVEYQRRLNQANAFDFDDLIMRTVELLQTYPDVAEYYRRRFRHVLVDEYQDT
NHAQYTLVRELVGTETNEAGIEPAELCVVGDADQSIYAFRGATIRNIEEFERDFPNARTV
LLEQNYRSTQTILNAANAVIARNPNRRAKRLWTDSGDGEKIVGYVADNEHDEAAFVAGEI
DALADKGEADYSDVAVFYRTNNQSRVFEEIFIRLGLPYKVVGGVRFYERREVRDMLAYLR
VLANPEDTVSLRRILNVPKRGIGDRAEAVIATYAERERISFAQALRGAVSGEVPLLNPRS
AKAITGFVELMDELGEVVESGAEVADILEAVLERTGYRAELEESDDPQDASRVENLTELV
TVAREFTEFTAEVAGPDGELPEADPGVPEPGSLPAFLERVSLVADADSVPSPDGGDSDDG
HDAGVVTLMTVHTAKGLEYPVVFGTGWEDGIFPHMRALGDPTELAEERRLAYVAITRARK
RLYVSRSMVRSAWGQPQMNPASRFLDELPADLVDWRRLAPSSSSGGFGSSGGSPRAATTW
GSRGGGGGSSSRAASTSPFGKGWKDTVALKLDVGDRVSHDKYGLGTVVACDGTGPRATAT
IDFGAAGKVRLMLIGSVPMVKL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctcttcgatctcccagcggacggtccggccaagccccggcactccgacctg
ctcgacgacctgaacccggcgcagcgcgaggccgtgacacacgcgggctcgccgctgctg
gtcgtcgcgggcgcgggttcgggcaagacccgggtgctgacccgccggatcgcgtacctg
ctggccgaacgggacgtgcaccccggccagatcatggcgatcacgttcaccaacaaggcg
gccgcggagatgcgggagcgggtgagcgacctcgtcggccgccgcgcgaacgccatgtgg
gtgtcgacgttccactccatgtgcgtgcggatcctgcgccgtgaggccaaaacgctggag
atgtcgtcgagtttctccatctacgactcggacgacacgaagcgcctcatcaccctcgtc
gcccgcgatctcgacatcgacccgaagaagtacgcggcgcgcacgctggccgtgcacatc
tcgaacctcaagaacgaactgatcgatccggagacggcggtcgccgacgcgggcaacgac
ctcgaacgccgcgtcgccgaggtgtacgtcgagtaccagcggcggttgaaccaggccaac
gcgttcgacttcgacgacctcatcatgcggacggtcgaactcctgcagacgtacccggac
gtcgccgagtactaccggcgccgtttccgccacgtgctcgtcgacgagtaccaggacacg
aaccacgcgcagtacacgctggtccgcgagctggtcggcaccgagacgaacgaggccggg
atcgagcccgccgagctgtgcgtcgtgggtgacgcggaccagtcgatctacgccttccgc
ggcgcgacgatccgcaacatcgaggaattcgaacgcgacttcccgaacgcgcggaccgtg
ctgctggagcagaactaccgctcgacccagacgatcctgaacgcggcgaacgcggtcatc
gcgcgaaacccgaacaggcgcgcgaagcggctgtggaccgactcgggcgacggcgagaag
atcgtcggctacgtcgcggacaacgagcacgacgaagcggcgttcgtcgcgggcgagatc
gacgcgctggcggacaagggcgaagcggactactccgacgtcgccgtcttctaccgcacc
aacaaccagtcccgtgtcttcgaagagatcttcatccgtctcggcctgccgtacaaggtc
gtcggcggggtgcggttctacgagcggcgcgaggtccgcgacatgctcgcgtacctgagg
gtgctggcgaacccggaggacacggtcagcctgcgccgtatcctcaacgtccccaaacgc
ggcatcggggatcgcgccgaagccgtcatcgcgacgtacgccgagcgtgagcgcatctcg
ttcgcgcaggcgttgcgcggtgccgtcagcggtgaggtgccgctgctgaacccgcgctcc
gccaaggcgatcaccggtttcgtcgagctgatggacgagctcggcgaggtcgtcgagagc
ggcgccgaagtcgccgacatcctcgaagccgtcctggagcgcacgggttaccgcgcggaa
ctcgaggagtccgacgacccgcaggacgcgtcgcgggtggagaacctgacggaactcgtc
accgtcgcgcgggagttcaccgaattcaccgccgaggtggccggtccggacggtgagttg
ccggaggcggacccgggggtgccggagccgggctcgctgcccgcgttcctggagcgggtt
tcgctggtggccgacgcggattcggtcccgtcgccggacggcggcgacagcgacgatggg
cacgacgcgggcgtggtcactttgatgaccgtgcacaccgcgaagggcctggagtacccg
gtcgtcttcggaacgggttgggaagacgggatcttcccgcatatgcgcgcgctcggtgac
ccgacggagctggccgaagagcgccggctcgcctacgtcgcgatcacgcgggcgaggaag
cggctatacgtctcccgttcgatggtgcgctcggcctggggccagccacagatgaacccg
gcttcgcggttcctcgacgagcttcccgccgatctggtggattggcgcaggctcgcgcct
tcctcttcttccggtggcttcggttcgtcaggcggttcgccgcgggccgcgacgacttgg
ggcagccgaggcggtggtggcggctcgtcgtcgcgggcggcgagcacgagcccgttcggc
aagggctggaaggacaccgtcgcgctcaagctcgacgtgggcgacagggtcagtcacgac
aagtacgggctcggaacggtcgtcgcctgcgacggcacgggcccgcgtgccacggcgacg
atcgatttcggtgcggccggcaaggtccggctgatgctgatcggcagcgtcccgatggtc
aaactctag
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