Amycolatopsis keratiniphila: AORI_1229
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Entry
AORI_1229 CDS
T02678
Symbol
uvrD
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aoi
Amycolatopsis keratiniphila
Pathway
aoi03420
Nucleotide excision repair
aoi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AORI_1229 (uvrD)
03430 Mismatch repair
AORI_1229 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoi03400
]
AORI_1229 (uvrD)
Enzymes [BR:
aoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AORI_1229 (uvrD)
DNA repair and recombination proteins [BR:
aoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AORI_1229 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AORI_1229 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF5867
Motif
Other DBs
NCBI-ProteinID:
AGM03818
UniProt:
R4SZD3
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All DBs
Position
1259967..1262054
Genome browser
AA seq
695 aa
AA seq
DB search
MVSASSPKSRPGLLDGLDPEQRAAACAPRGPVCVLAGAGTGKTRTITHRIAHLVRSGHVA
AGQVLAVTFTTRAAGEMRTRLRGLGVDAAQALTFHAAARRQLRYFWPQVVGDRPWELLEN
KFRYISQAANKAGLSTETELLRDLASEIEWSKASLVSPDDYPAVAARTQRDTPAPASQVA
EVYRNYEKVKNAAQVLDFDDLLLHTTAVLEEHTVVAQEFRERYRCFVVDEYQDVTPLQQR
LLDAWLGGRDDLTVVGDANQTIYSFGGASPRPLLEFTRRFPEATVVRLERDYRSTPEVVA
LANQVIGAARGRPAGSRLKLIGQRPSGPVPRFAEYDDETAEAAAVARRIRDLLDSGVAAS
EIAVLYRVNAQSEAYEQALAEMGIPYLVRGGERFFARAEVRQAMSALRMASTDADTGELV
TRVRSVLAKVGLTDQPPAGGAAKERWDALLSIVELAEELASTVDDADLPRFVAELEQRAT
AQHPPTVEGITLASLHAAKGLEWDAVFLVGLAEGTMPILHADGDEAAIEEERRLFYVGVT
RAREHLSLSWALARTSGNRRNRRRSRFLYGLIPEDHPAARVARSQQPKQAGNKARCRVCG
GPLPETLDIKLGRCSRCPSNVDEQLLEKLKSWRGERSRELKVPAFVVFTDATLVAIAEQR
PTDDTALCAISGIGATKLERFGAEVLDVVRASVES
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtggttagcgcatcgtccccgaagagtcgtccaggcctgctcgatgggctcgatcccgag
cagcgcgccgccgcctgcgcgccgagggggccggtctgtgtcctcgcgggagcggggacc
ggcaagacgaggacgatcacgcatcgcatcgcccacctggtccgttccgggcacgtcgcc
gctggtcaggtgctcgcggtaacgttcacgactcgcgcggcgggcgagatgcgcacgcgg
cttcgggggttgggtgtcgacgccgcccaggcgctcaccttccacgccgccgctcgccgc
cagcttcgctacttctggccgcaggtggtcggtgaccggccgtgggagctcctcgagaac
aagttccgctacatcagccaagccgccaacaaggccggtctcagcaccgagacggagctc
ctgcgcgacctcgccagtgagatcgagtggagcaaggcctctttggtatcgccggacgac
tacccggcggtcgccgcgcgtacgcagcgggataccccggctcccgcgtcgcaggtcgcg
gaggtctaccgcaactacgagaaggtcaagaacgccgcgcaggtgctcgacttcgacgat
ctgctcctgcacaccaccgcggtcctggaggagcacacggtggtggcccaggagttccgc
gagcgctaccgctgcttcgtcgtcgacgaatatcaggacgtcaccccgctgcagcagcgg
ttgctcgacgcctggctcggcggccgcgacgacctgaccgtcgtcggcgacgccaaccag
accatctattcgttcggtggggcttccccccgtccgctgctggagttcacgcggaggttc
cccgaggcgacggtcgtgcggctcgaacgggactaccggtcgactccggaggtcgtggct
ctcgccaaccaggtgatcggtgccgcgcgtggccgccctgcggggtcgaggttgaagctg
atcggccagcgtccttccgggccggtcccgcggttcgccgaatatgacgacgagaccgcc
gaggccgcggccgtcgcccgcaggatccgtgatctgctcgacagcggagtggcggccagc
gagatcgcggtgctttaccgcgtcaacgcccagtcggaggcttacgagcaggctctggcc
gagatggggatcccgtacctggtccgtggcggcgagcggttcttcgccagggcggaggtc
cggcaggcgatgtccgcgttgcggatggcgtcgaccgacgccgacaccggcgagttggtg
acccgggtccgctccgtgctcgcgaaagtagggctcacggaccagcctcccgccggaggt
gcggcgaaagagcgatgggacgcgcttctctcgatcgtcgagctggccgaggagctggcc
tccaccgtcgacgacgcggatctgccgcgtttcgtggcggagctcgagcagcgggcgaca
gcgcagcatccgccgacggtggagggcatcaccctggcctcgcttcacgcggcgaaaggg
ctcgaatgggacgctgtgttcctcgtggggctcgccgaagggaccatgccgatcctccac
gccgacggcgacgaggcggccatcgaagaagagcgccgactcttctatgtcggtgtcact
cgggcgcgagagcacctctcgctctcgtgggccttggccaggacatcgggaaaccgccgc
aaccggcgccgcagccgtttcctttacggcctcatccccgaagatcatccggcggcgagg
gttgcccgctcgcagcagccgaagcaggccggcaacaaggcccggtgccgggtgtgcggc
gggccgttgccggagacgctcgacatcaagctgggccggtgctcccgttgtccgtccaac
gtggacgagcagctgctcgagaagctgaagtcctggcggggggagcgctcgcgcgagctc
aaggtgccggccttcgtcgttttcacggatgcgacgctggtcgcgatcgccgagcagcgg
ccgacggacgacacggcgttgtgcgccatctccgggatcggcgcgacgaagctcgagcgc
ttcggagcggaggttctcgacgtcgtacgggcgtcggtggagtcttga
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