Amycolatopsis keratiniphila: AORI_2230
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Entry
AORI_2230 CDS
T02678
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aoi
Amycolatopsis keratiniphila
Brite
KEGG Orthology (KO) [BR:
aoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aoi03016
]
AORI_2230 (truB)
Enzymes [BR:
aoi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AORI_2230 (truB)
Transfer RNA biogenesis [BR:
aoi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AORI_2230 (truB)
Prokaryotic type
AORI_2230 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PUA
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AGM04818
UniProt:
R4T2A5
LinkDB
All DBs
Position
2390899..2391822
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AA seq
307 aa
AA seq
DB search
MSRPNQAPAKKRPAPPPGLVIVDKPSGMTSHDVVARARRFMGTRKVGHAGTLDPMATGVL
VLGIERATKLLGHLALDRKTYLATLSLGLSTTTDDAEGEPIAEAAPDVVEKITDEAIAAG
IAALTGDIQQVPSAVSAVKIDGKRAYARVRAGEEVVIPPRPVTVHRFDLLATRREAGRIE
LDAIVECSSGTYVRALARDLGAGLGAGGHLLALRRTTVGPFTLAKARTLDQLEDKPELSL
DLDAAVAAAFPRRDLDARTAQAVRYGQRVPAAGIKGTYGMFGPDGRVLALAADEGELARS
VVVLLPA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcgccccaatcaggctcctgccaagaaacgtccagccccgccgcccggtctcgtc
atcgtcgacaaaccgtccgggatgacttcccacgacgtcgtcgccagggcgcgtcgtttc
atgggcacccgcaaggtcgggcacgccggcaccctcgacccgatggccaccggtgtcctc
gtgctcggcatcgaacgcgcgacgaaactcctcggccacttggccttggaccgcaagacc
tatctcgcgaccctctccttgggactgtccaccacgaccgacgacgccgagggcgagccg
atcgccgaagccgccccggatgtcgtcgagaagatcaccgacgaagcgatcgccgccggg
atcgccgcgctgaccggcgacatccagcaggtgccgagcgcggtcagcgcggtcaagatc
gacggcaaacgcgcgtacgcccgcgtccgggcgggcgaagaggtcgtgatcccgccgcgt
ccggtcaccgtgcaccgtttcgatctgctcgccacccgccgcgaggcgggccggatcgaa
ctcgacgcgatagtcgaatgttcgtcggggacctacgtccgggcgctggcccgcgatctc
ggcgccgggctcggggccggtggacatctgctcgcgttgcggcgcaccacggtcggcccg
ttcaccctcgccaaggcccgcaccctcgaccagctcgaagacaagccggagctgtcgctg
gacctcgacgccgccgtcgccgccgcgttcccgcgccgcgatctggacgcccgcacggcg
caggcggtccgatatggacagagggtgcccgcggccgggatcaagggcacgtacgggatg
ttcgggccggacggtcgcgtgctcgccctcgcggcggacgaaggcgaactggcccggtcg
gtcgtcgtgttgctgcccgcctag
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