Amycolatopsis keratiniphila: AORI_5026
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Entry
AORI_5026 CDS
T02678
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
aoi
Amycolatopsis keratiniphila
Brite
KEGG Orthology (KO) [BR:
aoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aoi03009
]
AORI_5026 (rluB)
Enzymes [BR:
aoi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
AORI_5026 (rluB)
Ribosome biogenesis [BR:
aoi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AORI_5026 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AGM07610
UniProt:
R4SYJ2
LinkDB
All DBs
Position
complement(5588976..5589728)
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AA seq
250 aa
AA seq
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MTSDPHPDGIRLQKVLSQAGVASRRAAEDLIVRGRVSVDGKVVTELGRRVDPDNSVIHVD
GTRVQVREDLVYLLLNKPKGVHSTMNDDRGRPCVGDYLRGRYEETPGIVHVGRLDENTEG
LLLLTNDGDLGHRLMHPSFRVLKTYFAEVEGIVPRGLGKELRAGFELPDGIVKVDQFRVK
DMLAGRTQIELVIHEGRKHIVRRLMAATGHPVRKLVRTALGDVQLGAQRSGSIRRLNRGE
VGSLYRAVDL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgacccgcatcccgacggcattcggctgcagaaggtcctttcgcaggcgggc
gtcgcctcgcggcgcgcggccgaggacctgatcgtgcgcggtcgcgtgagcgtggacggc
aaggtggtcaccgaactcggccgccgggtcgatccggacaactccgtgatccacgtcgac
ggcacccgcgtccaggtccgcgaggacctcgtgtacctcctgctgaacaagcccaagggc
gtgcacagcacgatgaacgacgaccgcggccgtccgtgcgtcggcgactacctgcgcggc
cggtacgaggagacgcccggcatcgtgcacgtcggcaggctcgacgagaacaccgagggg
ctcctgctcctcaccaacgacggcgacctcgggcaccggctgatgcacccgtcgttccgg
gtgctgaagacctacttcgccgaggtcgagggcatcgtcccgcgcgggctcggcaaggaa
ctgcgcgcgggtttcgagctgccggacggcatcgtcaaggtcgaccagttccgcgtcaag
gacatgctggccgggcgcacccagatcgagctggtcatccacgagggacgcaagcacatc
gtgcggcggctgatggcggccaccgggcacccggtgcggaaactggtccggaccgcgctg
ggcgacgtccagctcggtgcccagcggtcgggttcgatccggcggctgaaccgcggcgag
gtcggctcgctgtaccgcgccgtcgatctctaa
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