Amycolatopsis keratiniphila: AORI_5103
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Entry
AORI_5103 CDS
T02678
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
aoi
Amycolatopsis keratiniphila
Pathway
aoi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AORI_5103 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoi03400
]
AORI_5103 (uvrA)
DNA repair and recombination proteins [BR:
aoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AORI_5103 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AORI_5103 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_29
AAA_16
RsgA_GTPase
APS_kinase
AAA_25
nSTAND1
AAA_21
AAA_22
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
ScfRs
cobW
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AGM07687
UniProt:
R4T9X3
LinkDB
All DBs
Position
complement(5673187..5676042)
Genome browser
AA seq
951 aa
AA seq
DB search
MADRLVVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARAGKAH
CPQCGEAISKQTPQQIVDQVLAMEEGTRFQVLAPVVRGRKGEYLDLFENLQQQGYARVVV
DGTIHPLTDPPKLKKQEKHQIAVIIDRLSVKTSSRQRLTDSVETALRLADGLIELEFVDL
PENDPHRVRGFSENLACPNGHPLAIEDLEPRSFSFNAPYGACPDCTGIGVRKEVDPELVV
PDDELSLGEGAIAPWAGGQSADYFIRLLESLSETIGFRMDTPWRKLPAKVQKAVLHGVDE
QVHVRYKNRYGRQRSYYASFEGVIPFLERRQEQTESEYMRERYEGYMREVPCPACQGTRL
KPEILAVTLEHKTQGDRSIAEVCALSIAEASRFLDELELGKREQVIAGAVLKEIQARLRF
LLDVGLNYLSLDRASGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIE
TLVRLRDLGNTLIVVEHDEDTIRSSDWVVDIGPGAGEHGGHIVHSGPYKKILRNKDSITG
AYLSGRTKIEVPAIRRPVDKKRQLTVVGAREHNLRGLDVAFPLGCLVSVTGVSGSGKSTL
VNDILATVLANKLNGARQVPGRHTRVNGLANVDKLVRVDQSPIGRTPRSNPATYTGVWDH
VRKLFAATTEAKVRGYQQGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCKGDR
YNRETLEVHYKGKTVSDVLNMPIEEAAEFFEPIKAIHRHLATLVDVGLGYVRLGQPAPTL
SGGEAQRVKLASELQKRSTGKTVYILDEPTTGLHFEDISKLIGVINGLVDKGNTVIVIEH
NLDVIKTSDWIIDMGPEGGSGGGTVIAEGTPEHVASVEESYTGQFLKTVLA
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatcgcctcgttgttcgcggcgcccgcgagcacaacctccgcggtgtggatctc
gacctgccccgcgacagcctgatcgtgttcaccggtctgtccgggtccgggaagtcgagc
ctcgccttcgacaccatcttcgccgaagggcagcgccgctacgtcgagtcgctgtcggcg
tacgctcgccagttcctcggccagatggacaagccggacgtcgacttcatcgagggcctc
tcgcccgcggtgtcgatcgaccagaagtccacctcgcgcaacccgcgttcgaccgtcggc
accatcaccgaggtctacgactacctgcgcctgctctacgcccgcgccggcaaggcgcac
tgcccgcagtgcggcgaggcgatcagcaagcagaccccgcagcagatcgtcgaccaggtg
ctcgcgatggaggaaggcacccgcttccaggtgctcgcgccggtcgtgcgcgggcgcaag
ggggagtacctcgacctcttcgagaacctgcagcagcagggctacgcgcgcgtcgtggtc
gacgggacgatccacccgctcaccgacccgccgaagctgaagaagcaggaaaagcaccag
atcgccgtcatcatcgacaggctttcggtgaagaccagctcgcggcagcgcctcaccgac
tcggtcgagacggcgctccggctggccgacggcctgatcgagctggaattcgtcgacctg
ccggagaacgacccgcatcgtgtgcgcggtttctccgagaacctggcctgcccgaacggc
cacccgctggcgatcgaggacctcgagccgcggtcgttctccttcaacgccccgtacggc
gcctgccccgattgcaccggtatcggcgtccgcaaggaggtcgacccggagctcgtggtc
ccggacgacgagctgtccctcggcgagggcgccatcgcgccgtgggccggcggccagagc
gcggactacttcatccgcctgctcgaatcgctgtcggagaccatcggcttccgcatggac
acgccgtggcgcaagctgccggcgaaggtgcagaaggccgtcctgcacggcgtcgacgag
caggtccacgtccgctacaagaaccgctacggccgtcagcggtcgtactacgcgagcttc
gagggtgtcatcccgttcctcgagcggcgccaggagcagaccgagtccgagtacatgcgc
gagcggtacgagggctacatgcgcgaggtgccgtgcccggcctgtcagggcacgcggctc
aagccggagatcctcgccgtcaccctggagcacaagacccagggcgaccggtcgatcgcc
gaggtctgcgccctttcgatcgccgaggcgtcgcggttcctcgacgagctggagctcggc
aagcgcgagcaggtcatcgccggcgcggtgctcaaggagatccaggcgcggctgcgcttc
ctgctcgacgtcggcctcaactacctctcgctcgaccgcgcctccgggacgctgtccggc
ggcgaggcacagcgcatccggctcgccacgcagatcggttccggtctggtcggcgtgctg
tacgtgctggacgagccgtcgatcgggctgcaccagcgagacaaccaccgcttgatcgag
acgctggtccgcctgcgggatctgggcaacacgctgatcgtcgtcgagcacgacgaggac
accatccgctccagcgactgggtggtcgacatcggccccggcgccggcgagcacggcggc
cacatcgtccacagtggaccgtacaagaagatcctgcggaacaaggattcgatcaccggc
gcgtacctttcgggccgcaccaagatcgaggtcccggcgatccgtcgcccggtcgacaag
aagcggcagctgaccgtcgtcggcgcgcgcgagcacaacctgcgcgggctcgacgtggcc
ttcccgctcggctgcctcgtgtcggtcacgggcgtctcgggttccgggaagtccacgctg
gtcaacgacatcctcgcgaccgtgctggcgaacaaactcaacggagcgcgccaggtcccg
ggccggcacacccgcgtgaacgggctggcgaacgtggacaagctggtccgcgtcgaccag
tcgccgatcggccgcaccccgcggtccaacccggcgacgtacaccggcgtctgggaccac
gtgcgcaagctgttcgccgcgaccaccgaggcgaaggtgcgcggctaccagcagggccgg
ttctcgttcaacgtcaagggcggccggtgcgaggcctgcgccggtgacggcacgatcaag
atcgagatgaatttcctgccggacgtgtacgtcccgtgcgaggtctgcaagggcgaccgg
tacaaccgcgagaccctcgaggtgcactacaagggcaagaccgtctccgatgtgctgaac
atgccgatcgaggaggctgccgagttcttcgagccgatcaaggcgatccaccggcacctg
gccaccctcgtcgacgtcggcctcggctacgtccggctcgggcagcccgcgccgacgctg
tccggcggtgaggcgcagcgcgtcaagctcgccagcgaactgcagaagcggtccaccggc
aagacggtctacatcctcgacgagccgaccaccggtctgcacttcgaggacatcagcaag
ctgatcggcgtgatcaacgggctggtggacaagggcaacacggtgatcgtcatcgagcac
aacctcgacgtcatcaagacctcggactggatcatcgacatgggccccgagggcggttcc
ggcggtggcaccgtgatcgcggagggcacgccggagcacgtcgcttcggtggaggagagc
tacaccggtcagttcctgaagaccgttctcgcgtag
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