Amycolatopsis keratiniphila: AORI_5164
Help
Entry
AORI_5164 CDS
T02678
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aoi
Amycolatopsis keratiniphila
Pathway
aoi03030
DNA replication
aoi03410
Base excision repair
aoi03420
Nucleotide excision repair
aoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AORI_5164 (polA)
03410 Base excision repair
AORI_5164 (polA)
03420 Nucleotide excision repair
AORI_5164 (polA)
03440 Homologous recombination
AORI_5164 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoi03032
]
AORI_5164 (polA)
03400 DNA repair and recombination proteins [BR:
aoi03400
]
AORI_5164 (polA)
Enzymes [BR:
aoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AORI_5164 (polA)
DNA replication proteins [BR:
aoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AORI_5164 (polA)
DNA repair and recombination proteins [BR:
aoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AORI_5164 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AORI_5164 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
DUF2330
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AGM07748
UniProt:
R4TB94
LinkDB
All DBs
Position
complement(5743915..5746656)
Genome browser
AA seq
913 aa
AA seq
DB search
MSPSENTTVANATPATAQAERPKLLLIDGHSMAYRAFFALPAENFKTKTGQTTNAVFGFT
SMLINLLRDEAPTHLAVAFDLSRKTFRSETFAEYKANRSSTPDEFKGQVGLVEDVLKVLG
IPALTKENYEADDIIATLTTQATAEGFDVLICTGDRDALQLVTDQVTVLYPKRGVSEMTR
FTPEAVEEKYGLTPAQYPDFAALRGDPSDNLPSIPGVGEKTAAKWIRQFGSFNELVDRVD
EVKGKVGDALREHLGAVMLNRQLTELIRDVELELGPTMLELRPWDREAVHALFDELEFRV
LRDRLFATLQSAEPEAEEGFEVSGSKLAPGALTEWLSAHTGTDKPVGLAFRTTGASVRSD
LKAITFAAADGEGAYVDVTTMDAEDDKALTAWLADEKIQKIGHELKIPLHAVKARGWAFA
GLVMDTALAAYLVRPGQRTFELDDLALRYLHRELRSEADTGDGQLSLLDGGAEDMEQKEI
QAELVKARAVFELAGALTKELEELGGAQLLAELELPLLQVITGLEAAGIAVDIEHLTDLE
AHYLSRVTQAAEEAYAVIGKQVNLGSPKQLQVILFDELGMPKTKRTKTGYTTDAEALQSL
FEKTEHPFLQHLLEHRDATRLRTTVEGLIKSVADDGRIHTTLLQTIAATGRLSSVDPNLQ
NIPIRTEEGRRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSQDEGLIQAFNSGEDLHTF
VASRAFSLPPEEITPELRFRVKAMSYGLAYGLSAYGLSQQLRISTEEAKEQMEAYFSRFG
GVRDYLHSVVGDAAKVGYTETIFGRRRYLPDLNSDNRQRREMAERMALNAPIQGSAADII
KVAMLNVHKALTEAKLKSRVLLQVHDELVLEVADGEREQLEALVRQGMGSAYELAVPLEV
SVGYGRSWNDAAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccgagtgagaacacgaccgttgccaacgccacacccgccaccgcacaggccgag
cggcccaaactgctgctgatcgacggccattcgatggcgtatcgcgccttcttcgcgctg
cccgcggagaacttcaagacgaagaccgggcagacgacgaacgccgtcttcgggttcacc
tcgatgctcatcaacctgctgcgcgacgaggcaccgacccacctggcggtggcgttcgac
ctctcgcgcaagacgttccggtcggagacgttcgcggagtacaaggccaaccgcagcagc
accccggacgagttcaagggccaggtcgggctggtcgaggacgtgctcaaggtcctcggc
atcccggcgctgaccaaggagaactacgaagccgacgacatcatcgccacgctcacgaca
caggcgaccgccgaaggtttcgacgtcctcatctgtacgggcgaccgtgacgcgctccag
ctggtgaccgaccaggtcaccgtgctgtacccgaagcgcggcgtgtccgagatgaccagg
ttcaccccggaggcggtcgaggagaagtacggcctcacgccggcgcagtacccggacttc
gccgcgctgcgtggcgacccttcggacaacctgccgagcatccccggggtgggggagaag
acggccgcgaagtggatcaggcagttcggctccttcaacgagctggtcgaccgggtcgac
gaggtcaagggcaaggtcggcgacgcgctgcgcgagcacctcggcgcggtgatgctgaac
cgccagctcaccgagctgatccgcgacgtcgagctggagctcggcccgaccatgctcgag
ctgcgcccgtgggaccgcgaggccgtgcacgcgctgttcgacgagctcgagttccgcgtc
ctgcgggaccggctcttcgccaccttgcagagcgccgagcccgaggccgaggagggtttc
gaggtcagcgggtcgaagctcgcgccgggcgccctcacggaatggctgtccgcgcacacc
ggcacggacaagccggtcggcctggcgttccgcaccaccggcgcctcggtccgctcggac
ctgaaggccatcaccttcgcggccgcggacggcgaaggcgcgtacgtcgacgtcaccacg
atggacgccgaggacgacaaggccctcacggcctggctcgccgacgagaagatccagaag
atcggccacgagctcaagatccccctgcacgccgtcaaggcccgcggctgggcgttcgcc
gggctcgtcatggacaccgcgctcgcggcgtacctggtccgccccggtcagcgcaccttc
gagctcgacgatctcgccctgcggtacctgcaccgtgagctgcggtccgaggccgacacc
ggggacgggcagctttcgctgctcgacggcggcgccgaggacatggagcagaaggagatc
caggccgagctggtcaaggcccgcgcggtcttcgagctcgccggcgcgctgaccaaggag
ctcgaagaactgggcggcgcgcagctgctcgccgagctcgaactgccgctgctgcaggtg
atcaccgggctcgaagcggcgggtatcgcggtcgacatcgagcacctcaccgatctggaa
gcgcattacctcagccgggtgacgcaggccgcggaggaggcgtacgcggtcatcggcaag
caggtcaacctcggttcgccgaagcagttgcaggtcatcctgttcgacgagctcggcatg
ccgaagaccaagcgcaccaagaccggttacaccaccgacgccgaggcattgcagagcctg
ttcgagaagaccgagcacccgttcctgcagcatctgctggagcaccgggacgcgacccgc
ctgcgcaccacggtcgagggcctgatcaagtcggtcgccgacgacggccgcatccacacc
acgctgctgcagacgatcgccgccaccggacggctctcgtcggtcgatccgaacctccag
aacatcccgatccgcaccgaagaaggccgccgcatccgcgacgcgttcgtcgtcggcgac
gggtacgccgaactgatgacggcggactacagccagatcgaaatgcggatcatggcgcac
ctttcgcaggacgagggcctgatccaggccttcaacagcggcgaggatctgcacactttc
gtggcgtcgcgcgcgttctcgctgccgccggaggagatcacgccggagctgcggttccgg
gtcaaggcgatgtcgtacggcctggcgtacgggctttcggcgtacggcctttcgcagcag
ctgcggatctcgaccgaagaggccaaggaacagatggaggcgtacttctcccggttcggc
ggcgtgcgcgattacctccattcggtcgtgggcgacgcggcgaaggtcggctacaccgag
acgatcttcggccgccgccgttatctgcccgatctcaacagcgacaaccgtcagcgccgc
gaaatggccgagcggatggcgctcaacgcgcccatccagggcagcgcggccgacatcatc
aaggtcgccatgctcaacgtgcacaaggcgctgaccgaggcgaagttgaagagccgcgtg
ctgctgcaggtccacgacgagctcgtcctcgaagtcgccgatggcgaacgcgagcagctg
gaagccttggtgcgccagggaatgggttcggcgtacgagctggccgtcccgctcgaggtc
tccgtcgggtacgggcggtcctggaacgacgccgcgcattag
DBGET
integrated database retrieval system
