Amycolatopsis keratiniphila: AORI_5546
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Entry
AORI_5546 CDS
T02678
Symbol
soxR
Name
(GenBank) putative MerR family transcriptional regulator
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
aoi
Amycolatopsis keratiniphila
Brite
KEGG Orthology (KO) [BR:
aoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoi03000
]
AORI_5546 (soxR)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
aoi01504
]
AORI_5546 (soxR)
Transcription factors [BR:
aoi03000
]
Prokaryotic type
Helix-turn-helix
MerR family
AORI_5546 (soxR)
Antimicrobial resistance genes [BR:
aoi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
AORI_5546 (soxR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR
MerR-DNA-bind
Unstab_antitox
HTH_17
MerR_2
HTH_Tnp_1
Ig_Shg
SelB-wing_1
Motif
Other DBs
NCBI-ProteinID:
AGM08129
UniProt:
R4SXP8
LinkDB
All DBs
Position
6290722..6291102
Genome browser
AA seq
126 aa
AA seq
DB search
MKSSTLSVGEVAERFGLATHVLRHWESVGLLKPARTGDRRRYDDNDLYRIAIILRAKEAG
LSLDGIREMFQKPSDREAILKQHKQELERRIAAAQASLAIVDCALGCEHDDFTQCAHFRE
AVARAG
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaagcaccttgagcgtcggcgaggtcgccgagcgcttcggcctggcgacgcac
gttctgcgccactgggaatccgtgggccttctcaagccggcgcggacgggcgatcggcgg
cggtacgacgacaacgacctctaccggatcgcgatcatcctgcgcgcgaaagaggcgggg
ctgagcctcgacggcatccgcgagatgttccagaagcccagcgatcgcgaagcgatcctc
aagcagcacaagcaagagctcgaacgacggatagcggcagcacaggcctcactcgcgatc
gtcgactgcgctctcgggtgcgagcacgacgatttcacccagtgcgcgcatttccgggag
gcggtggcgcgggccggttga
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