Amycolatopsis keratiniphila: AORI_5718
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Entry
AORI_5718 CDS
T02678
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aoi
Amycolatopsis keratiniphila
Pathway
aoi03030
DNA replication
aoi03430
Mismatch repair
aoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AORI_5718 (dnaQ)
03430 Mismatch repair
AORI_5718 (dnaQ)
03440 Homologous recombination
AORI_5718 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoi03032
]
AORI_5718 (dnaQ)
03400 DNA repair and recombination proteins [BR:
aoi03400
]
AORI_5718 (dnaQ)
Enzymes [BR:
aoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AORI_5718 (dnaQ)
DNA replication proteins [BR:
aoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AORI_5718 (dnaQ)
DNA repair and recombination proteins [BR:
aoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AORI_5718 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
UVR
Sulfotransfer_3
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AGM08301
UniProt:
R4T7F2
LinkDB
All DBs
Position
6467351..6469072
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AA seq
573 aa
AA seq
DB search
MDTGRRPGAAQLAFDELGTPLRDITFVVFDLETTGTKPGPDGITEIGAVKIRAGEIVGEF
ATFVNPGMPIPPQIVELTGITGAMVYDAPRIERVLPAFLEFISGAVLVAHNAAFDTGFMR
AACEGHGYHWPKTAVVCTVRLARRVISRDETPSYRLSALAALFGARTTPNHRALADARAT
VDVLHALLERVGNLGVHTLEELLDYLPEVTAVQRRKRSLAEHLPSRPGVYLFRGPSDEVL
YVGTSSDLRRRVRQYFTGSESRGRIREMVALAERVDAVECAHALEAAVRELRLIAAHRPM
YNRRSKNPRHSWWVALTEEAFPRLSVVRMPRDGMLGPFRTQTDARSAADTLAGASGLRTC
TQRISATSPNGTPCVLAELGRCGAPCAGKQTVEAYRPGVLAVSGLIAGTDGRPLRAAADQ
LARLAAAEHYEQAAQHRDQLAGLIRAVGRAHRQSALAGIPELIAAGPDGNGGWELAVIRH
GRLASAGVARRGVPPMPVVEMLVASAETVIPGPGPLFGAIPEEIGILLRWLTRPGVRLVR
TTHPWAEPAAVAGGWQEWLDLAASATALERVAG
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggacggcggcccggcgcggcgcaactcgccttcgacgagctgggaactcct
ttgcgggacatcaccttcgtcgtattcgacctggagaccaccgggacgaaacccggcccg
gacgggatcaccgagatcggcgcggtcaagatccgcgcgggcgagatcgtcggcgagttc
gccaccttcgtcaacccggggatgccgatcccgccgcagatcgtcgagctcaccggcatc
accggcgcgatggtctacgacgctccccggatcgagcgcgtgctgcccgcgttcctcgaa
ttcatctccggtgccgtgctcgtggcgcacaacgccgccttcgacaccgggttcatgcgc
gcggcctgcgagggccacggctaccactggcccaagacggccgtcgtctgcacggtccgg
ctcgcccgccgggtcatttcccgcgacgagacgcccagctaccggctttccgcgctggcg
gcgttgttcggagcgcgcacgacgccgaaccaccgcgcgctcgcggacgcgcgcgccacc
gtcgacgtcctgcacgcgctgctcgaacgggtgggcaacctcggcgtccacaccctcgaa
gagctgctggactacctgcccgaggtgaccgcggtccagcgccgcaaacggtcgctggcc
gaacatctgccgtcgaggccgggggtctatctcttccgcggcccgagcgacgaggtcctc
tacgtcgggacgtcgtccgatctgcgccgccgggtccggcagtacttcaccggttcggag
agccgggggcggatccgggagatggtcgcgctggccgagcgggtcgacgcggtggaatgc
gcgcacgcgctcgaagccgccgtccgcgagcttaggctgatcgccgcccaccgccccatg
tacaaccgccgttccaagaacccccggcactcgtggtgggtcgcgctgaccgaggaggcg
ttcccgcgcctctccgtggtccgcatgccgcgagacgggatgctggggccctttcgcacc
cagaccgacgcccggtccgccgcggacaccctcgccggcgcctccgggctgcggacgtgc
acccagcgcatctcggcgacctcgccgaacgggaccccctgcgtcctcgccgagctcggc
cgctgcggcgcgccgtgcgccgggaagcagacggtcgaggcgtaccggccgggagtgctg
gcggtgtccggcctcatcgccgggacggacgggcgtccgctgcgggccgccgccgaccag
ctggcccggctcgccgcggcggagcattacgagcaggccgcccagcatcgcgatcagctg
gccgggctgatccgcgcggtcggccgggcgcaccggcagtcggcgctggcgggtatcccg
gagctgatcgccgccgggccggacgggaacggcggctgggaactggcggtgatccggcac
ggcaggctcgcgtcggcgggggtcgcgcggcgcggggtgccgccgatgccggtcgtcgag
atgctcgtggcctcggcggagacggtgatcccggggcccggcccgctcttcggcgcgatc
cccgaagagatcggcatcctgctgcgctggctgacccgtccgggtgtccggctcgtgcgc
acgacacatccctgggcggagccggcggccgtcgccggcggctggcaggagtggctcgac
ctggcggcgagcgcgacggcgctggaacgggtggcgggctag
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