KEGG   Amycolatopsis keratiniphila: AORI_5758
Entry
AORI_5758         CDS       T02678                                 
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
aoi  Amycolatopsis keratiniphila
Pathway
aoi00010  Glycolysis / Gluconeogenesis
aoi00020  Citrate cycle (TCA cycle)
aoi00260  Glycine, serine and threonine metabolism
aoi00280  Valine, leucine and isoleucine degradation
aoi00310  Lysine degradation
aoi00380  Tryptophan metabolism
aoi00620  Pyruvate metabolism
aoi00630  Glyoxylate and dicarboxylate metabolism
aoi00640  Propanoate metabolism
aoi00670  One carbon pool by folate
aoi00785  Lipoic acid metabolism
aoi01100  Metabolic pathways
aoi01110  Biosynthesis of secondary metabolites
aoi01120  Microbial metabolism in diverse environments
aoi01200  Carbon metabolism
aoi01210  2-Oxocarboxylic acid metabolism
aoi01240  Biosynthesis of cofactors
Module
aoi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
aoi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
aoi_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
aoi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
aoi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:aoi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AORI_5758 (pdhD)
   00020 Citrate cycle (TCA cycle)
    AORI_5758 (pdhD)
   00620 Pyruvate metabolism
    AORI_5758 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    AORI_5758 (pdhD)
   00640 Propanoate metabolism
    AORI_5758 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AORI_5758 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    AORI_5758 (pdhD)
   00310 Lysine degradation
    AORI_5758 (pdhD)
   00380 Tryptophan metabolism
    AORI_5758 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AORI_5758 (pdhD)
   00670 One carbon pool by folate
    AORI_5758 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aoi04147]
    AORI_5758 (pdhD)
Enzymes [BR:aoi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AORI_5758 (pdhD)
Exosome [BR:aoi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AORI_5758 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like DAO GIDA FAD_oxidored AlaDh_PNT_C NAD_binding_8 FAD_binding_2 3HCDH_N Trp_halogenase Thi4 2-Hacid_dh_C Lycopene_cycl Amino_oxidase
Other DBs
NCBI-ProteinID: AGM08341
UniProt: R4T7J8
LinkDB
Position
6508884..6510257
AA seq 457 aa
MTDTSADLVILGGGSGGYAAAFRAAELGLSVTLIEKDKLGGTCLHRGCIPTKALLHAAEV
ADETRDAETFGVKAVLEGIDIAGVNKYKDGIISRLYKGLQGLAKAHKVNLVEGTGTFVGG
TTVEVDGTRYTGKNVILATGSYSRTLPGLELGGRIIASEQALSLDYIPKKAIVLGGGVIG
VEFASVWASFGVDVTIVEALPRLVPNEDEYASKQLERAFRRRRIAFKTGVRFTGAKQDDN
GVSVSLESGETLEADLLLVAVGRGPNSAGHGYEEAGVKMERGFVLTDDRLRTNLPNVYAV
GDIVPGLQLAHRGFQQGIFVAEEIAGQEPRVIDESGIPRVTYSHPEVASVGLTESQAKEK
YGSDVTTFTYDLGGNGKSQILKTSGGVKLIKAPDGPVVGVHMVGDRVGELIGEAQLIYSW
EAFPEDVAPLIHAHPTQTEALGEAFLALAGKPLHVHS
NT seq 1374 nt   +upstreamnt  +downstreamnt
gtgaccgacacctccgccgaccttgtgatcctgggtggcggatcgggcggctacgccgcc
gcgttccgcgcggccgagctgggcctttccgtcaccctgatcgaaaaggacaagcttggc
gggacgtgcctccaccgaggctgcatcccgaccaaggccctcctgcacgcggcggaggtc
gccgacgagacccgggacgccgagaccttcggtgtgaaggccgtgctggaaggcatcgac
atcgccggcgtcaacaagtacaaggacgggatcatctcgcgcctgtacaagggcctccag
ggcctggccaaggcgcacaaggtgaacctcgtcgagggcaccgggacgttcgtcggcggc
acgaccgtcgaggtcgacggcacccgctacaccggcaagaacgtcatcctcgccaccggt
tcgtactcgaggacgctgccgggcctggagctgggcgggcgcatcatcgccagcgagcag
gcgctttcgctggactacatcccgaagaaggccatcgtcctcggcggtggtgtcatcggt
gtcgaattcgcgtccgtctgggcgtccttcggcgtcgacgtcaccatcgtggaggcgctg
ccccgcctggtcccgaacgaggacgagtacgcgtccaagcagctcgagcgcgctttccgc
cgtcgcaggatcgccttcaagaccggtgtccggttcaccggtgccaagcaggacgacaac
ggcgtcagcgtgtcgctggagtccggcgagacgctcgaagccgacctgctcctggtcgcc
gtcggccgcggcccgaactcggccgggcacgggtacgaggaggccggcgtcaagatggag
cgcggtttcgtcctcaccgacgaccgcctgcgcaccaacctgccgaacgtctacgccgtc
ggtgacatcgtccccggcctgcagctcgcgcaccgcgggttccagcagggcatcttcgtc
gcggaagagatcgccggccaggagccgcgcgtgatcgacgagagcggcatcccgcgcgtc
acctactcgcaccccgaggtcgcttcggtcggcctgaccgagtcgcaggcgaaggagaag
tacggctccgacgtcaccaccttcacctacgacctcggcggcaacggcaagagccagatc
ctcaagacctccggcggggtcaagctgatcaaggctccggacggcccggtcgtcggcgtg
cacatggtgggcgaccgcgtcggcgagctgatcggcgaagcgcagctgatctacagctgg
gaggccttccccgaggacgtcgccccgctcatccacgcgcaccccacgcagaccgaggcc
ctcggtgaagcgttcctcgccctggcgggcaagccgctgcacgtccacagctga

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