Amycolatopsis keratiniphila: AORI_6873
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Entry
AORI_6873 CDS
T02678
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
aoi
Amycolatopsis keratiniphila
Brite
KEGG Orthology (KO) [BR:
aoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoi03400
]
AORI_6873 (sbcD)
DNA repair and recombination proteins [BR:
aoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AORI_6873 (sbcD)
Archaeal homologous recombinant proteins
AORI_6873 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
EndA_linker
Motif
Other DBs
NCBI-ProteinID:
AGM09455
UniProt:
R4T3R4
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All DBs
Position
complement(7685562..7686713)
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AA seq
383 aa
AA seq
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MKLLHTSDWHIGRTFHGADLLAEQEAVLSHLAELVAAESVDVVLVSGDIYDRAVPSAEAV
RVATTALGRIRQAGAKLVMTPGNHDSAPRLGAFAEFAAAGGLHLRATIDGLAEPVLLPDE
HGEVALYGIPYLEPEPARHALGVPEARGHTGVLTEAMRRIREDLAGRPSGTRAVVLAHAF
VTGGEPTESERTIAVGGVEQVPGSVFDGVDYVALGHLHGPQTLAEHLRYSGSPLAYSFSE
TRQRKSVWLVELGADGLAEVRRHELPVPRHLAMLRGELAELLSDPEHDGLTEHFLSFTVT
DRVRPIDAMRKLRERFPYAVHMDWQPEGGHDGAALKYAEAVRGRSDVEITRSFLEDCRGS
APSESEERLVLAALGAAGREREV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctcctgcacacctccgactggcatatcggccgcaccttccacggcgccgatctg
ctcgccgaacaggaagccgtgctgagtcatctcgccgagctcgtggccgccgagtcggtc
gacgtcgtgctcgtgtccggggacatctacgaccgcgcggtgccctcggcggaggccgtg
cgcgtggccaccacggcgctgggccggatccgccaggccggggcgaaactggtgatgaca
ccgggcaatcacgattccgcgccgcgactgggcgcgttcgccgaattcgccgcggcgggc
gggctgcacctgcgcgccacgatcgacgggctcgccgaaccggtgctgttgcccgacgaa
cacggcgaggtcgccctctacgggatcccgtatctggaaccggagcccgcgcggcacgcc
ctcggcgtgcccgaggcccgcggccacaccggcgtcctcaccgaagcgatgcggcggatc
cgggaggatctggccgggcggccgtccgggacacgggcggtggtgctcgcgcacgccttc
gtcaccggcggcgagccgaccgaatccgagcggaccatcgcggtcggcggcgtcgagcag
gtgccgggttcggtgttcgacggcgtcgattacgtcgcgctcggccacctgcacggcccg
cagaccctcgccgagcacctgcgctattcgggcagcccgctggcgtactcgttttccgag
acacgccaacggaaatcggtctggctggtggaactcggcgccgacgggctggccgaggtc
cgccgccacgaactgccggtgccgcggcatctcgcgatgctgcgcggcgagctggcggag
ctgctttcggacccggagcacgacggactcaccgaacacttcctttctttcacggtcacc
gatcgggtccgcccgatcgacgcgatgcgcaaactgcgtgagcggttcccgtacgcggtg
cacatggactggcagccggaaggcgggcacgacggggccgcgctgaagtacgccgaagcc
gtccgcgggcggtccgacgtcgagatcacccgcagtttcctggaggactgccgtggttcc
gcaccgtcggagagcgaggaacggctggtgctggcggcgctgggcgcggcgggcagggag
cgcgaagtatga
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