Amycolatopsis keratiniphila: AORI_7198
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Entry
AORI_7198 CDS
T02678
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
aoi
Amycolatopsis keratiniphila
Brite
KEGG Orthology (KO) [BR:
aoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoi03400
]
AORI_7198 (phrB)
Enzymes [BR:
aoi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AORI_7198 (phrB)
DNA repair and recombination proteins [BR:
aoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AORI_7198 (phrB)
Prokaryotic type
AORI_7198 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AGM09780
UniProt:
R4T4K5
LinkDB
All DBs
Position
complement(8003911..8005257)
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AA seq
448 aa
AA seq
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MTREAPVVLWFRRDLRLGDHAALLEASKHSKHVLALYVLDDALLKPSGAPRVAFLHGCLK
ALDDQLGGRLMLVKGDPVKEVVKAAREVGAATVHVSADTGPYGRRRDDEVEKALAEHDIA
WAETGSSYAITPGRITKPDGDPYRVFTPFYRAWVRHGWPRPADTGKSIVDWVEPPRSVEL
PKSPSLKGMELPEPGEKAALERWHEFLDDGLETYDEDRDRPDRPGTTRLSPYLRWGCVHP
RTLLADLAGNEGSGAKALRGEFAWREFHADVLWHRPETARKNYDSRFDAMEHESDDEAFR
RWCEGRTGFPIVDAGMRQLLAEGWMHNRVRMIVASFLVKDLHLPWWLGARHFMKHLVDGD
LASNQLNWQWVAGSGTDAAPYFRVFNPTTQGEKFDPAGDYVRRYVPELRSVPGKAVHKPE
NVKDYPAPMVDHAHERQVALERYGAIKG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagagaagccccggtagtcctgtggttccgccgcgacctccgcctcggcgaccac
gccgccctccttgaggcctcgaagcacagcaagcacgtcctcgcgctgtacgtcctcgac
gacgcgctcctcaaaccctccggcgccccgcgcgtcgcgttcctgcacggctgcctgaag
gcgctggacgaccagctcggcggacgcctgatgctggtcaagggcgacccggtcaaggag
gtcgtcaaggccgcgcgcgaggtcggcgccgcgaccgtgcacgtcagcgccgacaccggc
ccgtacggccgccgccgcgacgacgaggtcgagaaggcgttggcggagcacgacatcgcc
tgggccgagacgggttcgtcgtacgcgatcacgcccggccgcatcaccaaacccgacggg
gatccgtatcgcgtgttcaccccgttctaccgtgcgtgggtgcgccacggctggccgcgc
cccgccgacaccgggaagtccattgtggactgggtggagccgccgcgatcggtcgaactc
ccgaaatccccgtcgctcaaagggatggagctgcccgagcccggcgagaaggcggcgttg
gagcgctggcacgagttcctggacgacggcctggaaacctacgacgaggatcgtgaccgt
cccgatcgtcccggtacgacaaggctttcaccgtatctgcgctggggttgcgtccatccg
cgcaccctgctggcggacctcgccgggaacgaaggctccggcgccaaggcactgcgcggt
gagttcgcctggcgcgagttccacgccgacgtcctgtggcaccgccccgaaaccgcgcgg
aagaactacgattcgcggttcgacgccatggaacacgagagcgacgacgaggctttccgg
cggtggtgcgagggacgcaccgggttcccgatcgtcgacgccgggatgcgccagttgctc
gccgagggctggatgcacaaccgcgtccggatgatcgtggcgagcttcctggtcaaggac
ctgcatctgccgtggtggctcggcgcccggcatttcatgaagcatctggtcgacggcgat
ctcgcgtcgaaccagctgaactggcagtgggtcgcgggcagcggcaccgacgccgcgccc
tacttccgggtcttcaacccgaccacacagggggagaagttcgaccccgccggtgactac
gtccgccgctacgtccccgaactccggtctgtgccgggcaaagccgtgcacaaaccggag
aacgtgaaggactatccggcgccgatggtcgaccacgcgcacgaacgtcaggtcgccctg
gagcgctacggcgccatcaaaggttag
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