Aeromonas oralensis: ACPDZI_00380
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Entry
ACPDZI_00380 CDS
T11252
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aoj Aeromonas oralensis
Pathway
aoj03420
Nucleotide excision repair
aoj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACPDZI_00380 (uvrD)
03430 Mismatch repair
ACPDZI_00380 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoj03400
]
ACPDZI_00380 (uvrD)
Enzymes [BR:
aoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACPDZI_00380 (uvrD)
DNA repair and recombination proteins [BR:
aoj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACPDZI_00380 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACPDZI_00380 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
XUY24714
LinkDB
All DBs
Position
78637..80808
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSTLLDGLNDKQRDAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVIGDGVRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVLKALNLDEKHWAPRAVMGYINGKKDEGLRPGDIDLYGDPVTRTYQQIYKTYQET
CDRSGLVDFAELLLRAHELWLNKPHILEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGDT
GKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANCVIANN
AERLGKELWTEGAEGEPISLYAAFNEVDEARFVVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGD
RTLEILRNNARDQGQNLWQSAKALLNDKVLTGRAGNAVRGFVDLIDALEEQVSLLPLHQQ
ADIAIQHSGLKAMYLAEKGEKSQARVENLDELVTACRQYQRPDELEDMSDLSAFLAHAAL
ESGENQADEYADAVQLMTLHSAKGLEFPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGIKLGQRVLHPKFGEGIVLNFEGVGQQSRVQIQFDDVGAKWLVTAYARL
EAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcaaccctgctcgacgggctcaatgacaagcaaagagacgcggtggcggcc
ccccgttgcaacctgctggtgctggccggtgccggttcgggcaagacccgggtgctggtg
caccgtatcgcctggctgatgcaggtggaacgctgttcacccttctccatcatcgcggtc
acctttaccaacaaggcggcggcagagatgcgcggccgggtcgaaaaagtgatcggtgac
ggcgtgcgcggcatgtggatcggcaccttccacggcatcgcccaccgcctgctgcgggcc
caccatctggatgcgggcctgccgcaggatttccagatcctcgactccgacgaccagtac
cgcctcatccggcgggtgctcaaggcgctcaacctcgacgagaagcactgggccccccgc
gccgtgatgggctacatcaacggcaagaaggacgaggggctgcgccccggcgacatcgac
ctctacggtgaccccgtcacccgcacctatcagcagatctacaagacctatcaggagacc
tgcgatcgctccgggctggtggacttcgcagaactcctgctgcgcgcccacgagctgtgg
ctcaacaagccgcacatcctcgagcactaccgcgaccgcttccagaacatcctggtggat
gagttccaggataccaacggcatccagtacgcctggctgcggatgctggccggcgacacc
ggcaaagtgatgatcgtcggcgacgatgaccagtccatctacggctggcgcggtgccaag
atcgagaacatccaacgcttcctgaccgactatcagggcgccgagaccatccgcctcgag
cagaactaccgctccaccgccaatatcctcaaggccgccaactgcgtcatcgccaacaat
gccgagcgccttggcaaggagctgtggaccgaaggggccgagggggagccgatttcgctg
tacgccgccttcaacgaggtggacgaggcccgcttcgtggtcggccgcctcaaggattgg
aaagagaaaggtggcctcttggccgattgcgccatcctctatcgctccaacgcccagtcc
cgggtgctggaagaggcgctgatgcaggacgccatgccctaccgcatctacggcggtctg
cgcttcttcgagcgccaggaaatcaaagacgccatggcctacctgcggcttatcaacaac
cgtggcgacgacgccagcttcgagcgggtggtcaacaccccgacccgcggcatcggcgat
cgcaccctcgagatactgcgcaacaacgcccgcgatcagggccagaacctgtggcagtcg
gccaaggcgctgctcaatgacaaggtgctgaccggccgcgccggcaacgcggtgcgcggc
tttgtggatctgatcgacgcgctggaggaacaggtctccctgctgcccctgcaccagcag
gcggatatcgccatccagcactccggcctcaaggcgatgtatctggcggaaaaaggcgag
aaatcccaggcgcgggtagagaacctggacgaactggtcaccgcctgccgccagtaccag
cgcccggacgagctggaagacatgagcgatctctccgccttcctcgcccacgcagcgctg
gaatctggcgagaatcaggcggacgaatatgccgacgcggtgcagctgatgacattgcac
agtgccaagggcttggagttcccgctggtgctgctggtcggcgtcgaagaggggatgttc
cccagccagcaatccaccgaggagtcgggccggctggaagaagagcgccgcctctgttac
gtcggcatgacccgcgccatggagaagctctacatctgttatgccgagagccgccgcatc
tatggccgcgagatgttccacaagccgagccgctttatccgcgagatgcccgccgagtgt
ctggaagagatccggctgcgcactcaagtcagccgccccacccagtacggccgcttcagc
cagaacgaggtgcagcagagctttgacgccagcggcatcaagctcggccagcgggtgctc
catccgaaatttggggaaggaatcgtgctcaacttcgaaggggtcggccagcagagccgg
gtgcagatccagttcgacgacgtcggcgccaagtggctggtgacggcgtatgccagattg
gaagcgctgtaa
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