Aeromonas oralensis: ACPDZI_06555
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Entry
ACPDZI_06555 CDS
T11252
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aoj Aeromonas oralensis
Brite
KEGG Orthology (KO) [BR:
aoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aoj03009
]
ACPDZI_06555 (rimO)
Enzymes [BR:
aoj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACPDZI_06555 (rimO)
Ribosome biogenesis [BR:
aoj03009
]
Prokaryotic type
ribosomal protein modification factors
ACPDZI_06555 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
DapB_N
Motif
Other DBs
NCBI-ProteinID:
XUY25105
LinkDB
All DBs
Position
complement(1301553..1302881)
Genome browser
AA seq
442 aa
AA seq
DB search
MSNTKQAPKVGFVSLGCPKNLVDSERILTQLRTEGYDVVPSYDDAEVVVVNTCGFIDSAV
QESLEAIGEALAENGKVIVTGCLGAKENQIREIHPKVLEITGPHAYEEVLGHVHKYVEKP
THNPFTSLVPAQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKR
LKEAGVKEILVISQDTSAYGVDVKHRTGFYDGMPVKTSMVALCEELAKLGMWVRLHYVYP
YPHVDDVIPLMRDGKVLPYLDIPLQHASPRILKLMKRPGTVERTLERIQKWREICPEITL
RSTFIVGFPGETEEEFQMLLDFIDKAELDRVGCFKYSPVEGAKANELPDPVPEEVQEERF
QRFMELQQQVSIRKLARKVGKEMLVLIDEVDEEGATGRSAADAPEIDGLVYLNGETGLKP
GDMVKVRIDEADEYDLWASLID
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacacaaaacaggcccccaaagtaggattcgtctccttgggttgccccaaaaat
ctggtcgattccgagcgcatcctgacccagctgcgtaccgaagggtacgacgtggtgccc
agctatgacgatgcggaagtggtggtggtcaacacctgcggcttcatcgacagcgcggta
caggagtccctggaagccattggcgaggccctggccgagaacggtaaggtgatcgtcacc
ggctgcctcggtgccaaagagaaccagatccgcgagatccaccccaaggtgctcgagatc
accggtccccacgcctatgaagaggtgctgggccacgtccacaagtacgtcgagaagccg
acccacaaccccttcaccagcctggtaccggcccagggcgtcaagctgaccccccgccac
tacgcctatctgaagatttccgaaggctgcaaccaccgctgcaccttctgcatcatcccc
tccatgcgcggggatctggtgagccgtcccatcggcgaagtgctggccgaggccaagcgc
ctgaaagaggccggtgtgaaagagatcctggtcatctcccaggacacctccgcctacggt
gtcgacgtcaagcaccgcaccggtttctacgacggcatgccggtcaaaaccagcatggtg
gccctgtgcgaagagctggccaagctcggcatgtgggtgcgcctgcactacgtctacccg
tacccgcacgtggatgacgtcatcccgctgatgcgcgacggcaaggtactgccctacctc
gacatcccgctgcaacacgccagcccgcgcatcctcaagctgatgaagcgcccgggcacg
gtcgagcgcaccctggagcggatccagaagtggcgcgagatctgccccgagatcaccctg
cgctccaccttcatcgtcggcttccccggtgaaaccgaagaagagttccagatgctgctg
gacttcatcgacaaggcggagctggatcgggtcggctgcttcaaatacagcccggtcgaa
ggtgccaaggccaacgagctgccggatccggtaccggaagaggtgcaggaagagcgcttc
cagcgcttcatggagctgcagcagcaggtctccatccgcaagctcgcccgcaaggtcggc
aaggagatgctggtgctgatcgacgaggtggacgaagagggtgccactggccgctccgcc
gccgatgcccccgaaatcgacggcctggtctacctgaacggtgaaaccggcctcaagccc
ggcgacatggtcaaggtccgcatcgatgaagcggacgagtacgacctgtgggccagtctc
atcgactga
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