Aeromonas oralensis: ACPDZI_06660
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Entry
ACPDZI_06660 CDS
T11252
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
aoj Aeromonas oralensis
Pathway
aoj02020
Two-component system
aoj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aoj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACPDZI_06660
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACPDZI_06660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoj03021
]
ACPDZI_06660
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
aoj02035
]
ACPDZI_06660
Transcription machinery [BR:
aoj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACPDZI_06660
Bacterial motility proteins [BR:
aoj02035
]
Flagellar system
Flagellar assembly proteins
Stator
ACPDZI_06660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
GerE
Motif
Other DBs
NCBI-ProteinID:
XRJ35120
LinkDB
All DBs
Position
1323589..1324308
Genome browser
AA seq
239 aa
AA seq
DB search
MNKAQAYLRHQDSYVLVERHAPLVKRIAQHLLARLPSSVLLDDLIQAGMIGLLEASRNFD
GSKGASFETYAGIRIRGSMLDEIRRGDWVPRSVHRNSRTIAEAIENVEQAHGRDARDSEV
AAQMGVSLGEYHAMLQDVSCGKIIGIEDLGVSEDVIGHPDDEPGSNGFDELAAERFQGAL
AEHIGRLPEREALVLSLYYDEELNLREIGEVLNVSESRVSQIHSQAMHRLRARLRDWHV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcccaagcgtacttgcgtcatcaggattcctatgtgctggtcgagcgtcat
gctccgctggtgaaacggatcgcccagcatttgttggctcgcctgccaagcagtgtcttg
ctggatgacctgatccaggcaggtatgattggattgctcgaagcctcccgcaattttgac
ggcagcaagggggcgagctttgaaacctacgccgggatccgcatccgcggttccatgctc
gacgagatccggcgcggtgactgggtgccgcgttcggtacaccgcaacagccgcaccatc
gccgaagccatcgaaaatgttgaacaagcccatggccgtgatgctcgcgatagcgaagtc
gccgcccagatgggggtcagccttggtgagtatcacgccatgctgcaggatgtctcctgc
ggcaagatcatcggcatcgaagatcttggcgtcagcgaggatgtcatcggtcatcccgat
gacgagccgggcagcaatgggtttgatgaactggccgccgagcgttttcaaggggcgctg
gccgaacacatcggccgcttgccggagcgggaagcgctggtgctctccctttactacgat
gaagaactgaacttgcgtgaaataggcgaggtattgaacgtcagcgagtctcgcgtgagc
cagatacacagtcaggcgatgcacagattacgcgcgcgtttaagagattggcatgtataa
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