Aeromonas oralensis: ACPDZI_11010
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Entry
ACPDZI_11010 CDS
T11252
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
aoj Aeromonas oralensis
Pathway
aoj03030
DNA replication
aoj03430
Mismatch repair
aoj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACPDZI_11010 (holB)
03430 Mismatch repair
ACPDZI_11010 (holB)
03440 Homologous recombination
ACPDZI_11010 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoj03032
]
ACPDZI_11010 (holB)
03400 DNA repair and recombination proteins [BR:
aoj03400
]
ACPDZI_11010 (holB)
Enzymes [BR:
aoj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACPDZI_11010 (holB)
DNA replication proteins [BR:
aoj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACPDZI_11010 (holB)
DNA repair and recombination proteins [BR:
aoj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACPDZI_11010 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_5
Mg_chelatase
SDR-like
QueC
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XUY25423
LinkDB
All DBs
Position
2262666..2263613
Genome browser
AA seq
315 aa
AA seq
DB search
MYPWLIPDWHALSQTAAAGRLGHAWLLLGDPGLGKEQLAEQLARLHLCHRPDRGEPCGQC
HSCQLFEKGHHPDLGTLTTESKTIGVEAIREICSRLQNSAQLGRGKVVIIPDAERMTESA
ANALLKTLEEPAGDSLLLLIASQVSRLLPTILSRCHKHVCQLPAEGETVRWLAEQGHQAT
LAQVRICQGAPLRVLRYIEEQQDSARRELLESFLALAQTPTRANHVCGLLGSDTQVRLHW
LQLFLCDALKTQAGCGHHQLAMPDLTALSQQLAELHSSEKLLEAEQQLVELKMACQPGQL
SNPTIHLMNWLTRWL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtatccctggttgatcccggactggcatgccttgagccagacagccgcggccggtcga
ctcggtcacgcctggttgctgctcggcgatcccggtcttggcaaggagcagcttgcggaa
caattggcgcgcttgcacctctgccatcggcccgaccggggtgagccctgcggtcaatgt
cactcctgccagctgtttgagaagggccatcatccggatctgggcaccctgaccacggag
agcaagaccatcggggtcgaggccattcgcgagatctgttcacgcctgcagaattcggcc
cagcttggccgcggcaaggtggtgatcatcccggatgcggaacgcatgacggagtcggcc
gccaacgccctgctcaaaacactggaagagcccgccggcgacagtttgctgctgcttatc
gcctctcaggtttcccgtctgctgccgaccattctcagtcgctgccacaaacatgtctgc
cagttgcccgccgaaggtgagacggtgcgctggctggcagagcagggtcatcaggccacg
ctggcccaggtccggatctgccagggggcgccgctgcgggtgctgcgctatatcgaagag
cagcaagacagtgcccgccgggagctgctggagagttttctcgcgctggcacagacgccg
acccgggccaaccatgtgtgcggtctgctggggagcgatacccaggtcaggctgcactgg
ttgcagctgttcttgtgcgatgccctcaagacgcaggcaggttgcggccatcatcagctg
gcgatgccggatctgacggcgctcagccagcaacttgccgagcttcattccagcgagaag
ctgctggaggcagagcaacagctggtcgagctgaagatggcctgtcagccggggcagctc
tccaatcccaccatccatctgatgaactggctgactcgctggttatag
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