Aeromonas oralensis: ACPDZI_16935
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Entry
ACPDZI_16935 CDS
T11252
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aoj Aeromonas oralensis
Pathway
aoj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACPDZI_16935 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoj03019
]
ACPDZI_16935 (pnp)
03016 Transfer RNA biogenesis [BR:
aoj03016
]
ACPDZI_16935 (pnp)
Enzymes [BR:
aoj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACPDZI_16935 (pnp)
Messenger RNA biogenesis [BR:
aoj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACPDZI_16935 (pnp)
Transfer RNA biogenesis [BR:
aoj03016
]
Prokaryotic type
tRNA degradation factors
ACPDZI_16935 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_RRP5
CsrA
OB_RRP5_4th
LppA
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
XRJ33593
LinkDB
All DBs
Position
complement(3535300..3537438)
Genome browser
AA seq
712 aa
AA seq
DB search
MNPIVKSFQYGQHTVTLETGVMARQATAAVMVSMDDTCVFVTVVGKKEADHGRDFFPLTV
NYQERTYAAGRIPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVVATVMSVN
PAVSPDIVAMIGASAALAISGIPFGGPIGAARVGYMNGQYVLNPTTTELPQSDLDLVVAG
TANAVLMVESEAAILSEEVMLGAVVFGHEQMQAVINAINEFAADVGTKPWNWTAPAVNEA
LKAKVAELATAELGEAYRITEKAVRYETIGAIKARVVEQVIASGVEEDAKKIGEEFHSLE
SRIVRGRVVRGEPRIDGRDPEMIRALSVATGVLPRAHGSALFTRGETQAMVVATLGTERD
AQNIDELTGNRADRFMLHYNFPPYCVGETGMMGSPKRREIGHGRLAKRGVAAVMPSADEF
PYVVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEEEGFVVLSDI
LGDEDHLGDMDFKVAGTTEGVTALQMDIKIEGITKEIMEIALKQARGARLHILKVMDEAI
QAPRAEISDFAPRIHTIKINPEKIKDVIGKGGSVIRALTEETGTNIELDDDGTVRIAAVD
GDAAKEAIRRIEAITAEIEVNRIYEGKVVRLADFGAFVNILPGKDGLVHISQITDARVQN
VADYLKIGDVVKVKVLEVDRQGRVRLSIKEANAPTEAAAEPAVAAVEEPAAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctattgtaaagtcattccagtacggtcaacacaccgtcactctggaaaccgga
gtgatggcccgtcaagccactgcggccgtcatggtcagcatggacgatacctgcgtattt
gtgaccgtagttggcaagaaagaggccgatcacggccgtgatttcttcccgctgaccgtc
aactaccaggagcgtacctatgctgctggtcgtatcccgggtggtttcttccgtcgtgaa
ggccgtccgagcgaaggcgagaccctgatctcccgtctgatcgaccgtcctattcgtccg
ctgttcccggaaggcttcctcaatgaggttcaggtggttgccaccgtcatgtccgtgaac
ccggccgtttctcccgacatcgttgccatgatcggtgcctccgcggcgctggccatctcc
ggtatcccgttcggcggcccgatcggtgcagcccgcgtgggttacatgaacggtcagtat
gtgctgaacccgaccactaccgaactgccgcagagcgatctggacctggtagttgccggt
accgccaacgcagtgctgatggttgaatccgaagcggccatcctctccgaagaggtgatg
ctgggtgcggtagtattcggtcacgagcagatgcaggccgttatcaacgccatcaacgaa
ttcgctgccgacgtcggcaccaagccgtggaactggactgctcctgccgtcaacgaagca
ctgaaagccaaggttgccgagctggcgacagctgagctgggtgaagcctaccgcatcacc
gagaaggccgtgcgttacgaaaccatcggtgccatcaaggctcgcgtggttgagcaagtc
atcgcttccggcgtggaagaagatgccaagaagatcggcgaagagttccacagcctggaa
agccgcatcgtccgtggtcgcgtcgtccgtggcgagccgcgcatcgatggtcgtgatccg
gagatgatccgcgccctgtccgtcgccaccggtgtactgccgcgtgcccacggctccgcc
ctgttcacccgtggtgaaactcaggccatggtcgttgccaccctgggcaccgagcgtgac
gcccagaacatcgacgagctgaccggcaaccgcgccgatcgcttcatgctgcactacaac
ttcccgccatactgcgtcggtgagaccggcatgatgggtagcccgaaacgtcgtgaaatc
ggtcacggtcgtctggccaagcgcggcgttgctgcggtgatgccgagcgccgacgagttc
ccgtacgtggtacgtgtggtatctgaaatcaccgaatccaacggctcctcctccatggcc
tccgtctgtggttcctccttggcgctgatggacgccggtgtgccgatcaaggcctctgtt
gccggtatcgccatgggtctggtgaaggaagaagaaggtttcgtcgtgctgtccgacatc
ctgggtgacgaagatcacctgggcgacatggacttcaaggttgccggtaccaccgaaggt
gtgaccgcactgcagatggacatcaagatcgaaggcatcaccaaagagatcatggagatt
gccctgaagcaagctcgtggtgctcgcctgcacatcctgaaagtgatggacgaagccatc
caggcaccgcgtgccgagatctccgatttcgccccgcgcatccacaccatcaagatcaac
ccggagaagatcaaggacgtcatcggtaaaggtggctccgtgatccgtgccctgaccgaa
gagaccggcaccaacatcgagctggatgatgacggtaccgtccgcatcgccgccgttgac
ggtgatgccgccaaggaagcgatccgccgtatcgaggccatcaccgccgagatcgaagtg
aaccgcatctacgaaggcaaagttgtccgtctggctgacttcggtgccttcgtcaacatc
ctgccgggcaaggatggtctggtgcacatctcccagatcaccgatgcacgcgtgcagaac
gtggccgactacctgaagatcggtgacgtggtcaaggtgaaggtactggaagtggaccgt
cagggccgcgtgcgtctctccatcaaggaagcgaacgccccgaccgaagccgcagccgag
ccggctgttgccgccgtcgaagagccggctgccgaataa
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