Aeromonas oralensis: ACPDZI_20030
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Entry
ACPDZI_20030 CDS
T11252
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
aoj Aeromonas oralensis
Pathway
aoj00470
D-Amino acid metabolism
aoj00550
Peptidoglycan biosynthesis
aoj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aoj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACPDZI_20030 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACPDZI_20030 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aoj01011
]
ACPDZI_20030 (murD)
Enzymes [BR:
aoj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ACPDZI_20030 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
aoj01011
]
Precursor biosynthesis
Amino acid ligase
ACPDZI_20030 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
XRJ33947
LinkDB
All DBs
Position
complement(4144072..4145355)
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AA seq
427 aa
AA seq
DB search
MVIIIGLGKTGLSCVDYFLGRGVTPLVMDTRANPPGRDQLPAEVELIHGLDGELLKQAHM
IVASPGIALATPELQAAAEFGVRIVGDIELFVRETQVPVIAITGSNGKSTVTTLVGEMIA
EAGLKVGVGGNIGTPALELLKQPMDLCVLELSSFQLETTHSLRAAASVVLNLSEDHMDRY
QGMADYRAAKMEIHQHSQHILINRDDAQTLPDVGQVWQSFGLDCNGYGRCELDGRHWLTL
HGEPLLAVDEMKIVGAHNQANALAAMALCDAVGIPREPQLRVLRRFEGLPHRARFVREVN
GVRWINDSKATNVGATLAAVAGVRESVKGRLLLLAGGQGKGQDFGPVQALLGSQIDHMYC
FGQDAEVLLALGEQTERVADLDAAVAKAAADARPGDWVLLAPACASLDQFKSFEARGDRF
TELVQKL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcatcatcggactcggcaaaaccggactatcctgcgtcgattacttcctcggc
cgtggcgtgacacctctggtgatggacacccgcgccaacccgcccggcagggatcaactg
cctgccgaggtggaactcatccacgggctggatggcgagctgctcaagcaggcacacatg
atagtggcgagcccgggcattgccctggcgacgcccgaactgcaagccgccgccgagttc
ggggtgcgcatcgtcggcgacatcgagctgttcgtgcgcgagacccaggtgccggtgatc
gccatcaccggctccaacggcaagagcacggtcaccaccctggtgggcgagatgatcgcc
gaagccggcctcaaggttggggtaggtggcaacataggcacgccggcgctcgagctgctc
aagcagccgatggatctctgcgtgctggagctctccagcttccagctggagaccacccac
agcctgcgcgccgccgcctccgtggtattgaacctctccgaagatcatatggatcgctat
cagggcatggccgactatcgcgccgccaagatggagatccatcagcactcccagcacatc
ctgatcaatcgcgacgatgcccagaccctgcctgatgtgggtcaggtgtggcagagcttc
ggcctcgactgcaacggctatggccgctgcgagctggatggccgtcactggctgactctg
cacggcgaaccgttgctggctgtggacgagatgaagatcgtcggcgcccacaaccaggcc
aacgcgctggccgccatggccctgtgcgatgcggtcggtatcccgcgcgagccgcagttg
cgagtactgcgtcggttcgaggggctgcctcaccgtgcccgcttcgtgcgggaggtgaat
ggggtgcgctggatcaacgactccaaggccaccaacgtgggggcgaccctggctgccgtg
gccggggtgcgcgagtcggtgaagggccgcctgctgctgctggccggtggccagggcaag
ggccaggatttcggcccggtgcaggcgctgctcggcagccagatcgatcacatgtactgt
ttcggccaggatgccgaggtgctgctggcgctgggcgagcagaccgagcgggtggcggat
ctggatgccgcggtcgccaaggcggccgccgatgccagacccggtgactgggtgctgctg
gcgccggcctgcgccagcctggaccagttcaagtctttcgaagcgcgcggtgatcgtttc
accgagctggtacagaagttatga
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