Aeromonas oralensis: ACPDZI_21550
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Entry
ACPDZI_21550 CDS
T11252
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aoj Aeromonas oralensis
Pathway
aoj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACPDZI_21550 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoj03019
]
ACPDZI_21550 (recQ)
03400 DNA repair and recombination proteins [BR:
aoj03400
]
ACPDZI_21550 (recQ)
Enzymes [BR:
aoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACPDZI_21550 (recQ)
Messenger RNA biogenesis [BR:
aoj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACPDZI_21550 (recQ)
DNA repair and recombination proteins [BR:
aoj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACPDZI_21550 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
XRJ34133
LinkDB
All DBs
Position
complement(4441876..4443711)
Genome browser
AA seq
611 aa
AA seq
DB search
MTAIAETLPDPQPENPLALLQAVFGYQQFRPGQLEIIEQIVAGRDALVLKPTGGGKSLCY
QIPALLRPGLGVVVSPLISLMKDQVDSLRANGVAAVYINSALSREEMIQNFAAMRRGEIK
IVYVSPERLLQHEFMDRLAELPLGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPV
VALTATADEATRSDMLHRLELHDPFIHTASFDRPNIRYSLVEKFKAAEQLLRYVQSQKGN
CGIVYCSSRNRVEEVAERLSRHGCKAAPYHAGLPLELRQRTQESFLKDDIEIVVATVAFG
MGIDKPNVRFVVHYDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLDNIEN
PQQLQVEQYKLNVMAAFAEAQTCRRQVLLNYFGEYNDKPCGNCDICLDPPQSYDGTEDAQ
KALSCVWRVGQNFGVGYVVEVLRGSLNQRIKDHGHDKLSTYGIGKDQSHEYWMSVIRQLI
HKGLLTQNITRNLVLQLTEAARPVLRGEVKLDLAVPRLQPISSRKEKRNGLLDNANYDKR
LFKELRALRKQIAEDEEVPPYVVFNDATLVEMAQLMPMTEAEMLAVNGVGHRKLERFGEA
FMDLIIDYCRR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccattgccgaaaccctgcctgacccccagccagagaatccgcttgccctgctg
caggcggtgttcggctatcagcaattccggccgggccagctcgaaatcatcgagcagatc
gtggcggggcgcgatgcgctggtgctcaagccgaccggtggcggcaagtcgctctgctac
cagatccctgcgctgttgcggcccgggctcggggtggtggtctctcccctcatttcgctg
atgaaggatcaggtggacagcctgcgcgccaacggcgtggcggcggtctacatcaactcg
gcactgagccgggaagagatgatccagaacttcgccgccatgcggcgcggcgagataaaa
atcgtctacgtctcccccgaacgcctgctgcagcacgagttcatggatcggctggcggag
ctgccgctcggcctgttcgccatcgacgaggcgcactgcgtctcccagtgggggcacgat
tttcggccggaatacgcggcgctgggccggctcaagcagtggttcccgcaggtgcccgtg
gtggcgctcaccgccaccgccgacgaggcgacccgcagcgacatgctgcatcgactggaa
ctccacgatccctttatccacaccgccagcttcgatcggcccaacatacgctacagcctg
gtggagaagttcaaggcggcggagcagctgctgcgctacgtgcagagccagaagggcaac
tgcggcatcgtctactgctccagccgcaatcgggtggaggaggtggccgagcggctctcc
cgccacggctgcaaggcggctccctatcacgccggcctgccgctcgagctgcgccagcgc
actcaggagtccttcctcaaggacgacatagagatagtggtggcgacggtggcgttcggc
atgggtatcgacaagcccaacgtgcgtttcgtggtgcactacgacatcccgaagaacatc
gagtcctattatcaggaaaccggccgtgctggccgtgacggtaccccggccgaggcgctg
ctgctgtacgatcccgccgacatcggtcgggtgcgccggctgctcgacaacatcgaaaac
ccccagcagttgcaggtggagcagtacaagctcaacgtgatggcggccttcgccgaggcg
cagacctgccgccgccaggtgctgctcaactacttcggcgagtacaacgacaagccgtgt
ggcaactgcgacatctgcctcgatccgccccagagttatgatggcaccgaagacgcccag
aaggcgctctcctgcgtctggcgggtgggacagaatttcggggtgggttatgtggtggag
gtgctgcgcggttcgctgaaccagcgcatcaaggaccacggccacgacaagctgtcgacc
tacggcatcggcaaggatcagagccacgagtactggatgagcgtgatccgccagctgatc
cacaaggggctgctgacccagaacatcacccgcaatcttgtgctgcagctgaccgaggcc
gcccgtcccgtgctgcgcggcgaggtgaagctggatctggcggtgccgcgcctgcagccc
atctctagccgcaaggagaagcgcaacggtctgctcgacaacgccaactacgacaagcgg
ctgttcaaggagctgcgcgccctgcgcaagcagatcgccgaggatgaagaggtgccgccc
tacgtggtgttcaacgatgccaccctggtcgagatggcgcagctgatgccgatgaccgag
gcggaaatgctggcagtcaacggcgtgggtcaccgcaagctggaacgctttggcgaagcc
tttatggacctgatcatcgactactgccgtcggtaa
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