Aeromonas oralensis: ACPDZI_22040
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Entry
ACPDZI_22040 CDS
T11252
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
aoj Aeromonas oralensis
Pathway
aoj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aoj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACPDZI_22040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoj03021
]
ACPDZI_22040
Transcription machinery [BR:
aoj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACPDZI_22040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
PhyR_sigma-like
HTH_23
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
XRJ35783
LinkDB
All DBs
Position
4538784..4539296
Genome browser
AA seq
170 aa
AA seq
DB search
MGTGSFQTQLHRLYQEHHGWLCSLLRHRLGNTCDAADLAQDIYLQLIRKAHIPSAEECRR
HLMQIAKGKLIDLYRRRALEARYLEQQTHQPNPQAPSEELRAIQREALGAVESALQRQPS
KIRQALLLSRLGGLGHQDIASQLQVSISSVEKYIAQGVQSCHRSQRGNDA
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgggcacaggctccttccagacgcagttgcatcgtctgtatcaggaacatcacgggtgg
ctctgctcgctgctaagacacaggctgggcaatacctgcgatgccgcggatctggcgcaa
gatatttaccttcagctcatcaggaaagcgcatattccctcggcggaggagtgtcgtcgc
cacctcatgcagatcgccaagggcaagctgatcgacctttatcgccggcgcgcgctggag
gcacgctacctcgagcagcaaacccaccagcccaacccgcaggccccctcggaagagctg
cgtgccatacagcgcgaggcactgggtgcggtcgagtcagccctgcagcgccaacccagc
aagattcgccaggcattgctgctctcacgcctgggcggcctcggccatcaggacatcgcc
agtcagctgcaggtgtccatctcctccgtcgagaaatatatcgcccagggtgtgcaaagt
tgccatcgcagccagcgcggcaacgacgcctga
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