Alistipes onderdonkii subsp. vulgaris: A3BBH6_06190
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Entry
A3BBH6_06190 CDS
T06406
Symbol
hupB_1
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
aok
Alistipes onderdonkii subsp. vulgaris
Brite
KEGG Orthology (KO) [BR:
aok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aok03032
]
A3BBH6_06190 (hupB_1)
03036 Chromosome and associated proteins [BR:
aok03036
]
A3BBH6_06190 (hupB_1)
03400 DNA repair and recombination proteins [BR:
aok03400
]
A3BBH6_06190 (hupB_1)
DNA replication proteins [BR:
aok03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A3BBH6_06190 (hupB_1)
Chromosome and associated proteins [BR:
aok03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
A3BBH6_06190 (hupB_1)
DNA repair and recombination proteins [BR:
aok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
A3BBH6_06190 (hupB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BBL00383
LinkDB
All DBs
Position
complement(735603..735920)
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AA seq
105 aa
AA seq
DB search
MNKTQFVKAVAAESGQTVAATADVVDAVMEMIAVCMEHDEKIVLPGFGSFSVQERAARTM
RNPRTGKPLKVAACRVVKFRAGSKLREQAAKLAKDKKAKAAKAKK
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacccagtttgtaaaagccgtagccgccgagagcggtcagacggtcgccgct
accgctgatgtggtggatgcagtaatggaaatgatcgccgtatgtatggagcatgacgaa
aagattgtcttgcccggctttggttctttctcagtacaggagcgtgcggctcgtacgatg
cgcaatccccggacaggaaagcctttgaaagtcgcggcctgccgggtcgtgaagttccgt
gcgggctcgaaactccgggagcaggcggccaagctggccaaagacaagaaggccaaggcc
gccaaagcgaagaaatag
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