KEGG   Alistipes onderdonkii subsp. vulgaris: A3BBH6_10090
Entry
A3BBH6_10090      CDS       T06406                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
aok  Alistipes onderdonkii subsp. vulgaris
Brite
KEGG Orthology (KO) [BR:aok00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:aok03016]
    A3BBH6_10090 (truB)
Enzymes [BR:aok01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     A3BBH6_10090 (truB)
Transfer RNA biogenesis [BR:aok03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    A3BBH6_10090 (truB)
 Prokaryotic type
    A3BBH6_10090 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 PG_binding_2 LisH_WDR26
Other DBs
NCBI-ProteinID: BBL00773
LinkDB
Position
1144339..1145055
AA seq 238 aa
MKETLDLRGLNFEEGYIAVIDKPLSWTSTDVVRKIKSALRRLGYRKIKVGHAGTLDPLAT
GVLLVCIGRATKMVDALQAEEKEYVADVMLGATTPSYDLEHPVDATFPTQHITRGKVLEA
LAALSGERLQSPPVYSAKKIDGMRAYELARAGEEVEMRKALVHIYEMELLEYDLPRIRIR
VRCSKGTYIRSLAHEIGQALESGAHLTSLCRTRSGGFRVENAHSLDDFLKKLQELETK
NT seq 717 nt   +upstreamnt  +downstreamnt
atgaaggagacactcgacctgcggggcctcaacttcgaagagggctacatcgccgtcatc
gacaagcccctgagctggacgtccaccgacgtcgtacgcaagatcaagtccgcgctccgc
aggctcggctaccgcaagatcaaggtcggccacgcgggcacgctcgacccgctggccacg
ggcgtccttttggtctgcatcggccgcgccaccaagatggtcgacgccctgcaggccgag
gagaaggagtacgtggccgacgtcatgctgggtgccacgacccccagctacgacctcgaa
caccccgtcgacgcgaccttccccacacagcacatcacgcgcgggaaggtactcgaggcc
ctcgccgcactctcgggcgaacgcctccagtcgccgccggtctattcggccaaaaagatc
gacggcatgcgcgcctacgaactggcgcgcgcgggcgaggaggtcgaaatgcgcaaggcg
ctcgtccacatctacgaaatggagctcctggaatacgacctgccgcgcatccgcatccgc
gtgcgttgcagcaagggcacctacatccgttcgctggcccacgaaatcgggcaggcgctc
gaaagcggcgcgcacctgacttccctttgccggacgcgcagcggcggcttcagggtcgaa
aacgcccacagcctcgatgattttctaaaaaaattgcaggaacttgaaacaaaatag

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