Alistipes onderdonkii subsp. vulgaris: A3BBH6_10130
Help
Entry
A3BBH6_10130 CDS
T06406
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aok
Alistipes onderdonkii subsp. vulgaris
Brite
KEGG Orthology (KO) [BR:
aok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aok03032
]
A3BBH6_10130 (topA)
03400 DNA repair and recombination proteins [BR:
aok03400
]
A3BBH6_10130 (topA)
Enzymes [BR:
aok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A3BBH6_10130 (topA)
DNA replication proteins [BR:
aok03032
]
Prokaryotic type
DNA Topoisomerases
A3BBH6_10130 (topA)
DNA repair and recombination proteins [BR:
aok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A3BBH6_10130 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
MarR_2
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
BBL00777
LinkDB
All DBs
Position
1148744..1151041
Genome browser
AA seq
765 aa
AA seq
DB search
MQENLVIVESPAKAKTIEKFLGKDYIVKSSFGHIRDLSKKDLGINIDDEFRPVYEIPGDK
KKVVDELTKLAKSKTVWLASDEDREGEAIAWHLTEVLGLPVDQTKRIVFHEITKRAILEA
IENPRTVNMDLVNAQQARRILDRLVGFELSPVLWKKVRPSLSAGRVQSVAVRLIVERERE
IIAFRSAPYFRVVAQFYAANDPEKTLFKAELPSRFETQAEAEAFLRSCIGATFTVSKAEE
KPAQRFPAPPFTTSTLQQEAGRKLGMSVSQTMSVAQHLYEQGLITYMRTDSVNLSQQALA
QCKEEITRLYGEKYSSWHNYKTKTKGAQEAHEAIRPSYIDRQSIEGTPAEKKLYDLIWKR
TVASQMVCAELDRTTIVIDMSGSSQQFVATGEVVRFDGFLRLYSESTDDDQAAESGEGLL
PKMAQGDELLSTQITATERFTQAPARYNEASLVKRLEELGIGRPSTYAPTITTIINRGYV
VKQNREGQKRNYVQMTLTGDKLATKNLSESYGKEKNRLSPTDIGMVVNDYLETQFKPIMD
YNFTASVEKEFDRIADGDITWVKMIHDFYGPFHQMVDTAIGTQTDKKSQARILGNDPKTG
HIVKARIGRYGPMVEIEGEEGQKGRFASLKKGQLIESITLEEALALFALPRDLGQLDGEE
LSVGIGKYGPYVRHGKSFASLQKGDDPYTLTYERAVEIVHAQKAAAAAANTPLRSFPEEP
DMLVKNGRYGAYIAYKGKNYRLPKGSKPEELTLDDCLKIVADSKK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaaatttagtaatcgtcgagtcccccgccaaggccaaaaccatcgagaagttc
ctcggcaaggactatatcgtcaagtcgagtttcggacacatccgcgacctgtcgaaaaaa
gacctgggtatcaatatcgacgacgagttcaggcccgtctatgaaatcccgggcgacaag
aagaaagtggtggacgaactgaccaagctggccaagagcaagaccgtatggctggcgtcc
gatgaagaccgcgaaggagaagccatcgcatggcacctgaccgaagtgttggggctcccc
gtcgaccagaccaagcgcatcgtcttccacgaaatcaccaagcgggcgatcctcgaagcc
atcgagaacccccgcacggtcaacatggatctggtcaacgcacagcaggcacgccgtatc
ctcgaccgcctggtcggcttcgagctttcgcccgtgctgtggaagaaagtgcggccgtcg
ctttcggccggccgcgtgcagagcgtcgccgtacggctgatcgtcgagcgcgagcgcgag
atcatcgccttccgctcggcaccctatttccgcgtcgtggcacagttctacgcggccaac
gaccccgaaaagaccctcttcaaggccgaactcccgtcgcgcttcgaaacgcaggccgag
gccgaggcattcctccgcagttgcatcggcgccactttcaccgtgtcgaaagccgaagag
aaacccgcacagcgtttcccggcaccgcccttcacgacctcgacgctccagcaggaggcg
ggccgcaagctgggcatgtccgtttcgcagacgatgtccgtcgcccagcacctctacgag
cagggtctcatcacctacatgcgtaccgactcggtaaacctctcgcaacaggcactggcc
cagtgcaaagaggagatcaccagactctacggcgaaaaatattcgtcgtggcataactac
aagaccaagaccaagggtgcccaggaggcgcacgaagccatccgcccgtcgtatattgac
cggcagtcgatcgagggcaccccggccgaaaagaaactctacgacctgatctggaagcgc
accgtagcctcgcagatggtctgcgccgaactcgaccgcacaaccattgtgatcgacatg
tcgggctcatcgcagcaattcgtcgccacaggcgaagtcgtccgcttcgacggcttcctg
cgcctctactccgaatccacggacgacgaccaggccgccgaaagcggcgaagggctgctc
cccaaaatggcacagggcgacgagctgctttcgacgcagatcaccgccacggaacgcttc
acgcaggccccggcacgctacaacgaggcttcgctcgtcaagcgcctcgaggagctgggc
atcggacgtccttcgacctacgcgccgaccatcacgacgatcatcaaccgcggctacgtg
gtcaagcaaaacagggaggggcagaaacgcaactacgtgcaaatgaccctcacgggcgac
aagctcgccacgaaaaacctctcggaaagctacggcaaggagaagaaccgcctttcgccg
acggacatcggcatggtcgtcaacgactacctcgaaacgcagttcaagccgatcatggac
tataacttcacggccagcgtcgaaaaggaattcgaccgcatcgccgacggcgacatcacg
tgggtgaagatgatccacgatttctacggccccttccaccagatggtcgacacggccatc
ggcacgcagaccgacaagaagagccaggcacgcatcctgggcaacgaccccaagacgggg
catatcgtcaaggcacgcatcggccgctacggcccgatggtcgagatcgaaggcgaggag
gggcagaaaggccgcttcgcctcgctcaaaaagggccagctgatcgagtcgatcacgctc
gaggaggcgttggcgctcttcgcgctgccccgcgacctgggccagctcgacggcgaagag
ctctcggtgggcatcggcaaatacgggccctacgtgcgccacggcaaatcgttcgcatcg
ctgcagaagggcgacgacccctacacgcttacctacgagcgggccgtggagatcgtccat
gcccagaaggctgcggccgccgcggccaacactccgctgcggagcttccccgaagagccc
gacatgctggtcaagaacggccgttacggggcctacatcgcctacaagggcaagaactac
cgcttgcccaagggcagcaaacccgaagagctcacgctcgacgactgtctgaagatcgtc
gccgactcgaaaaaatag
DBGET
integrated database retrieval system
