Alistipes onderdonkii subsp. vulgaris: A3BBH6_16170
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Entry
A3BBH6_16170 CDS
T06406
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
aok
Alistipes onderdonkii subsp. vulgaris
Brite
KEGG Orthology (KO) [BR:
aok00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aok02000
]
A3BBH6_16170
Transporters [BR:
aok02000
]
Other transporters
Pores ion channels [TC:
1
]
A3BBH6_16170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
TTR_TEN1-4
FERM_C
CooC_C
SusE
Big_1
Motif
Other DBs
NCBI-ProteinID:
BBL01381
LinkDB
All DBs
Position
complement(1920780..1923743)
Genome browser
AA seq
987 aa
AA seq
DB search
MLRTCCLAALLGTLPAVMHAAGTPDYDTLQQNDTRRISGRVTDDTGKPLMGVTVVEKGTT
NGVSTTADGSYTLRLQNAENAVLEFSFIGYRNTELPAGTKTTLDVQLTESVTTMDNVVVI
GYGTTTKKELTGSVSSLKSDDFKQGNITNPLQLLQGQVAGLNIVRADGGDPNGDFEIQLR
GMTTMAGGASPLVVIDGVVGGDLSNVSPDDIASIDVLKDGSAAAIYGTRGTNGVILVTTK
KAHAGENRIEFSAYVAMQSVDKKPDVMSASEYRNTIRQYFPDKASSYDFGGSTDWFDAVT
RKHPVSQNYNVSSSGGSAKLNYRASVSYTNDIGLVKKTGNEKLRGRLNVSQSLIRDRLKV
DYNFAYTTGKGSYADKFIMRQAVLRNPTEPIYETNGNNPQYGKYFFSPGIDYHNPVAMLE
QRDDEGIRKEFSGSVNASLRIIDGLKISAMGAIIERSERYGHYYGRYYPVNIGNNGTAET
YNDHYKNKMLEATIDYSGTFGDHKLQAIAGYSFSEESSESYDQMNYKFDTDIFGFYNIGS
GGALKEGLASMGSSKEDNRLIAFFGRVMYNYKEKYLFSASVRYEGSSRFGDNHKWGTFPA
VSLGWRISREPWLKDAKWLNELKLRAGFGITGNQEIGNYRSLSILRKGSSNFYYNNKWIS
TYEPGSNPNPDLRWEKKKEFNVGLDMSVLGNRLNVTVDYYNRRTKDLLYTYTVPVPPNLY
PSKFANVGTIDNKGIEVTVNATPISRKNFSWNLAATISHNKNNLVKFSNEDYEMVQIQTG
YFPDDLKMYTMRIVEGGSLGNFWGPKFLGFNDNGGAIYEDLDGVEGITEADYQVIGNAYP
DVLLSLQNTFSYKQWSLSFLLRSSIGNDVLNQSRVYYEGFGYFGTRNILRSTLDHANYKD
GAYYSSRFVEDGSYLKLDNITLSYDFKLKSKVISKLRCYVTAQNLFTITGYKGIDPEVSI
SGLQPGIDWYDFYPRTRTFVLGAAIAF
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcacctgttgtctggccgcgctgctcggtacgctgccggccgtcatgcatgca
gccggtaccccagattacgacaccttgcaacaaaacgacacccgccggatctccggccgg
gtaaccgacgacacaggcaagcccctgatgggcgtaacggtcgtcgagaaaggtacgacc
aacggcgtcagcaccactgccgacggcagctatacgctgcgtctgcaaaatgcggaaaat
gccgtcctcgaattctcattcatcggctaccggaacacggaacttccggcaggaacgaaa
acaacgctcgatgtgcagctcaccgagtcagtcacgacgatggacaacgtagtcgtgatc
gggtacggtaccaccacgaaaaaagagctgaccggctcggtctcctccctcaagagcgat
gatttcaaacaagggaacatcaccaatccgctgcaactgctccagggacaggttgcaggc
ctgaatatcgtacgcgccgacggcggagaccccaacggcgacttcgaaatccagttgcgg
ggcatgaccacaatggccggcggcgcttcgccgttggtcgtcatcgacggcgtcgtgggc
ggcgacctgtcgaacgtcagtcccgacgacatcgcctcgatcgacgtgctgaaagacggt
tcggccgctgcgatctacggcacacgaggtacgaacggtgtgattctggtgacaacgaaa
aaagcccatgcgggggagaaccgtatcgaattctcggcttatgtcgccatgcaaagcgtg
gacaaaaaacccgacgtgatgtcggcgagcgaataccgcaacacgatccggcaatatttc
cccgacaaagcgtcgtcgtacgatttcggcggatcgacagactggttcgacgccgtcacg
cgcaaacaccctgtaagccaaaattataacgtatcctcatcgggcggctccgcaaaactc
aactaccgcgccagcgtctcctacaccaatgacatcgggctggtgaaaaaaaccgggaac
gagaaactccgcggtcgcctgaacgtgagccagtcgctcatccgggatcggctgaaggtg
gattataattttgcgtacaccaccggcaagggttcctatgcggacaagttcatcatgcga
caggccgtattgcgcaacccgaccgaacccatttacgaaaccaacggcaacaacccccag
tacggcaaatacttcttctcgccgggaatcgactaccacaaccccgtggcgatgctcgaa
caacgtgacgacgaaggcatccgcaaagagttctcgggcagcgtcaatgcttcgctgcgc
atcatagacggtctgaaaatcagtgccatgggcgccatcatcgagcgttcggaacgctat
gggcactattacggccgctattacccggtaaatatcggcaacaacgggacggcggaaact
tacaacgaccactacaagaacaagatgctcgaagcgacgatcgattattcgggcacgttc
ggcgaccacaaactgcaagccatcgccggttactcgttcagcgaggaaagttcggaaagc
tacgaccagatgaactacaagttcgatacggacatcttcgggttctacaacatcggcagc
ggcggggcgctcaaggaagggctcgcctcgatgggcagcagcaaggaagacaaccggctc
atcgccttcttcggccgcgtgatgtataattacaaggaaaaatacctcttctcggcatcg
gtgcgctatgaaggttcatcgcgtttcggcgacaaccacaaatggggaaccttcccggcc
gtgagcctcggctggcgcatatcgcgcgaaccgtggctgaaggacgccaaatggctcaac
gagctcaagctgcgcgccggcttcggcatcacgggcaaccaggagatcggcaactaccgt
tcgctgtcgatcctgcgcaagggttcgtcgaatttctattacaacaacaagtggatcagc
acctatgaacccggcagcaatcccaaccccgacctgcgctgggagaagaagaaagagttc
aacgtcgggctcgacatgagcgtgctcggcaaccggctcaacgtcacggtcgactactac
aaccgccgcaccaaggatctgctctacacctataccgtacccgtaccgcccaacctctac
ccttcgaaattcgccaacgtcggcacgatcgacaacaagggtatcgaagtgacggtcaac
gccacgccgatttcacgcaagaatttcagctggaacctcgcggcgacgataagccacaac
aagaataacctggtcaaattctccaacgaggattacgaaatggtgcaaatccagaccggc
tacttccccgacgacctgaaaatgtataccatgcgcatcgtcgaaggcggttcgctgggc
aacttctggggcccgaaatttttgggattcaacgataacggcggcgccatctacgaagac
ttagacggtgtagagggcattaccgaagcggactaccaggttatcggcaacgcatatccc
gacgtactgctgtcgctgcagaataccttcagctacaaacagtggagcctgagcttcctg
ctgcgcagttccatcggcaacgacgtcctgaaccagagccgtgtctattacgaagggttc
ggttacttcggcacccgcaatattctgcgctcgacactcgaccatgccaactacaaggac
ggcgcatactattcgtcgcggttcgtggaggacggctcctacctcaagctcgacaacata
acgctgagctacgacttcaaactcaaatcgaaggtcatctccaagctgcgctgctatgtc
acggcacaaaacctctttaccatcaccggctacaagggaatcgaccccgaagtcagcatt
tcggggctgcaacccggcatcgactggtatgacttctatccccgcacgcgtacattcgtt
ctcggagccgccatcgcattctaa
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