Alistipes onderdonkii subsp. vulgaris: A3BBH6_16420
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Entry
A3BBH6_16420 CDS
T06406
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
aok
Alistipes onderdonkii subsp. vulgaris
Pathway
aok03030
DNA replication
aok03430
Mismatch repair
aok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A3BBH6_16420
03430 Mismatch repair
A3BBH6_16420
03440 Homologous recombination
A3BBH6_16420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aok03032
]
A3BBH6_16420
03400 DNA repair and recombination proteins [BR:
aok03400
]
A3BBH6_16420
Enzymes [BR:
aok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A3BBH6_16420
DNA replication proteins [BR:
aok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A3BBH6_16420
DNA repair and recombination proteins [BR:
aok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A3BBH6_16420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
RCF1-5-like_lid
AAA_5
AAA_2
AAA_14
AAA_16
TIP49
DNA_pol3_gamma3
AAA_30
Rad17
AAA_18
AAA_24
Mg_chelatase
AAA_19
nSTAND3
RNA_helicase
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
BBL01406
LinkDB
All DBs
Position
complement(1959325..1961364)
Genome browser
AA seq
679 aa
AA seq
DB search
MSDFIVSARKYRPATFASVVGQKHITSTLKNAIERGQLAHAYLFCGPRGVGKTTCARIFA
KAINCLNPNGSEACNECESCRSFNEGRSLNIHELDAASNNSVEDIRTLIEQVRIIPQVGR
YSVFIIDEVHMLSAAAFNAFLKTLEEPPAHAIFILATTEKHKIIPTILSRCQIYDFNRIR
VEDGVEYLKYIASQEGIAADEESLNLIAQKADGGMRDALSMFDKAVSFCGKALDYRNVAQ
TLNVLDYDTYFSVTEMLLAGNYVDTLVTFDSVLSRGFSGQTFMAGLNRHMRDLLMAKRPE
TLRLIEMTGTLLERYRTQAGACDVEFLFGAISCLTELDGKIRQSSNQRLLVELGLMKIAG
LGQKKNDSLTSSGEYPLPTLTPRTAGPASAAAPAAAGQPATATAQAAEVSATGNPATNAP
AANASGNPAAPAAATAQPAGVSATGNPATNAPATSASGNPAAPASATAQPAAQAAGAATA
PPSAATSAAMPAASPAGRPAAGTSAGPTAQGTLPVQPAPEMKRRPLISGASLSELLASAG
GDPDEELSDGETPDEPETVRIDPDCAEKLEHARGRILNLIKEKRPRFVPAFELMAFRDNT
ISVSVPTTELREEILRSKTGMLMRIAELAGIEGMIELEVTVNEEIRAARPIKLEDRVRYI
TEKNPLVAELRKALDLEVE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattttatcgtcagcgcacggaaataccgccccgcgaccttcgcctcggtcgtc
ggacagaaacatatcacctccacgcttaaaaatgcgatcgagcgcgggcagttggctcac
gcctacctgttctgcggcccccgcggcgtaggcaagaccacttgtgcccgcatcttcgca
aaggccatcaactgcctgaaccccaacggatcggaggcctgcaacgaatgcgaatcgtgc
cgttcgttcaacgaagggcgctcgttgaacatccacgagctggacgccgcgtcgaacaac
tcggtggaagatatccgcacactgatcgaacaggtgcgcatcatcccgcaggtagggcgc
tactcggtattcatcatcgacgaggtgcacatgctctcggcggcggcgttcaacgccttc
ctcaaaacgctcgaagagccgcccgcacacgcgatcttcatcctcgcaacgaccgaaaaa
cacaagatcatcccgaccatcctctcgcggtgccaaatctacgatttcaatcgcatccgc
gtcgaggacggcgtcgaatacctcaaatacatcgcctcgcaggagggcatcgcagccgac
gaagagtcgctcaacctcattgcccagaaagccgacgggggtatgcgcgacgccctgtcg
atgttcgacaaggccgtgtcgttctgcggcaaggcgctcgattaccgcaacgtcgcccag
acgctcaacgtcctggactacgacacctacttcagcgtcacggagatgctgctcgcgggc
aactatgtcgatacgctggtgaccttcgacagcgtgctgtcgcggggtttctcggggcag
accttcatggcggggctgaaccgccacatgcgcgacctgctgatggccaagcgccccgaa
acgctgcggctgatcgaaatgaccgggacgctgctcgaacgataccggacgcaggcgggc
gcctgcgatgtcgagttcctgttcggagccatctcctgcctgacggagctcgacgggaag
atccggcaatcgtccaaccagcggttgctcgtcgagctgggcctgatgaagatcgcaggg
ctcggccaaaaaaaaaatgactctctgacatcttccggggaatatccccttcctaccctc
accccccgcacggcgggccccgcatctgcggcggctccggcagcggccgggcagccggca
accgcaacggcacaagcggcagaggtttcggcgaccggaaatccggcaacgaacgccccg
gcggcaaatgcctccggcaaccccgcagccccggcagccgcaacggcacaaccggcaggg
gttagcgcgaccggcaatccggcaacgaatgccccggcgacaagcgcctccggcaacccc
gcagccccggcaagcgcaacggcacaaccggcagcgcaagcagcaggagccgcaacggca
cccccttccgcagcgacgtccgcagcaatgcctgccgcgtccccggccggaaggccggca
gcgggtacatccgccggcccgactgcacagggaacactcccggtacagcccgcgccggag
atgaaacgacggccgctgatctcgggcgcatcgctctcggagctgctcgcctcggcaggc
ggcgaccccgacgaggagctgtcggacggcgaaacgcccgacgaaccggaaaccgtgcgc
atcgacccggactgtgccgaaaaactggagcacgcccgaggcaggatactgaacctcatc
aaggagaaacgcccgcgcttcgtgccggctttcgaactgatggcgttccgcgacaacacg
atctcggtgagcgtaccgacgacggagctgcgcgaggagatcctgcgcagcaaaaccggg
atgctgatgcgcatcgccgaactggcgggcatcgagggtatgatcgaactggaggtcacg
gtcaatgaagagatccgggcggcacgcccgatcaagctcgaagaccgcgtccgctacatc
acggagaagaacccgctcgtcgcggaactccgcaaagcactggacttggaagtagaataa
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