Alistipes onderdonkii subsp. vulgaris: A3BBH6_17430
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Entry
A3BBH6_17430 CDS
T06406
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aok
Alistipes onderdonkii subsp. vulgaris
Pathway
aok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A3BBH6_17430 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aok03400
]
A3BBH6_17430 (recD2)
Enzymes [BR:
aok01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A3BBH6_17430 (recD2)
DNA repair and recombination proteins [BR:
aok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3BBH6_17430 (recD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
CbiA
DEAD
NPHP3_N
PIF1
AAA_28
TrwB_AAD_bind
MeaB
AAA_22
NTPase_1
nSTAND3
SLFN-g3_helicase
TsaE
UvrD_C
AAA_16
UvrD-helicase
HerA_C
HHH_2
AAA
SRP54
T2SSE
AEP_C962R
PPL4
Thymidylate_kin
MobB
ResIII
Motif
Other DBs
NCBI-ProteinID:
BBL01507
LinkDB
All DBs
Position
complement(2068016..2070184)
Genome browser
AA seq
722 aa
AA seq
DB search
MNEHPATLLRCVVERITYQNPENGYSVLKVKVKGYNDLVTLVGNLLEVPVGSVLLCRGEW
KVDKRYGSQFVAATWEETMPATVYGIEKYLGSGLVKGIGPRFARAIVQRFGTETIDIIET
DIERLYEVPNIGRKRVAKIRESWEKQKDIKNVMLFLQGYGVSTAYAAKIYREYGKESIDK
VKENPYRLADDIWGIGFKTADGIAAKMGYEKEDPRRCRSGILYTLGQLSDEGHVYAGEEQ
LVKAAGQLLEAGEISIREVLEQMIRSDDLILDKDAIYLPPFYHAECGTSRRLRDLAESTG
RSLFDGLFDPSSLTAETGIEYDEVQLAAIRQAVTSKVMVLTGGPGTGKTTTTQGIIAALK
KAGLRVLLAAPTGRAAKRMSEATGMEAKTIHRLLEYNPQDGYKRNDENPLEGDALIVDEC
SMIDILLMNNLLKAVPVGMRLVFVGDIDQLPSVGAGNVLRDIIDSQRIPVVRLVRIFRQA
QKSRIVMNAHTINQGRFPDTSNGRDTDFFFMREDDPERAAETIVRLVKERLPRAYRESPD
RIQVLTPMQRGVVGAANLNLLLQQALNPSGPSLGRGGYTYRQGDRVMQLRNNYDKDVFNG
DLGYIREVDTEDRMLTVDFDGKKVEYDVTELDELTLAYATTIHKAQGSEYPIVVMPVLMT
HFVMLQRNLIYTGITRAKKICVLIGAMKALAYAVRDMSVLKRNTSLRERLNPSLTTDGKL
RG
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacacccggcaactcttctgcgctgtgtcgtggaacgtatcacctatcagaat
cccgagaacggatactcggtgctgaaggtcaaggtgaagggctataacgaccttgtcacg
ctcgtgggtaacctgctggaggttcccgtgggcagcgttcttctgtgccgcggcgaatgg
aaggtggacaaacgctacggcagccagttcgtcgccgcgacatgggaggagacgatgccc
gccacggtgtacgggatcgaaaaatacctcggcagcggattggtcaagggcatcggcccg
cggttcgcccgggctatcgtccagcgattcggaacggagaccatcgacatcatcgagacg
gacatcgaacggctttacgaagttccgaacatcgggcggaagcgtgtggcgaagatccgg
gagagctgggagaagcaaaaagatatcaagaatgtcatgctcttcctgcagggctacggc
gtgagcacggcctatgctgcgaaaatctaccgggaatacggcaaggagagtatcgacaag
gtgaaagaaaatccctaccgccttgccgacgatatctggggtatcggcttcaagaccgcc
gacggcatcgccgcaaagatgggctatgagaaagaggacccgcggcgatgccggagcggc
atcctctatacgctgggacaactctcggacgaaggacatgtctacgccggggaggaacag
ttggtaaaggctgcggggcaacttctcgaagccggcgaaatctctatccgggaggttctg
gagcagatgatccgatccgacgaccttattctcgataaggatgccatctaccttcctccg
ttctaccatgccgagtgcggtacgtcgcgtcgcctgagagatttggcagagagtacgggc
cgttcgttgttcgacgggcttttcgatccgtcgtccctcaccgcggaaaccggcattgaa
tacgacgaagttcagcttgcggctatccggcaggccgtcacgtccaaagtcatggtgttg
accggcggccccggtacgggtaagacgactacgacgcagggaattatcgcggccttgaaa
aaagccggcctgcgcgtgctgctggcggcaccgacgggacgtgctgccaagcgtatgagc
gaggcgacgggcatggaggccaagaccatccaccggctgttggagtacaacccgcaggac
ggctacaagcgcaacgacgagaacccgctggaaggcgacgcgctgatcgtggacgagtgt
tctatgatcgacatccttttgatgaacaacctgctgaaagccgttcccgtggggatgcgg
ctggtgttcgtcggcgacatcgaccagctgccgagcgtcggggcgggaaacgtcctgcgc
gacatcatcgactcgcagcgtatccccgtcgtgcggctcgtgcgcatcttccggcaggcg
cagaagagccgtatcgtgatgaacgcccacaccatcaaccagggacgcttccccgatacg
agcaacggccgcgacaccgactttttcttcatgcgggaggacgaccccgaacgggccgcc
gaaaccatcgtccggctggtgaaggagcgcctgccccgcgcctaccgggaaagtccggac
cgtattcaagtacttacgccgatgcagcggggcgtcgtgggcgccgcgaacctgaacctg
ctgttgcagcaggcattgaatccttcggggccgagcctcggccgcggcggctacacctac
cgacagggcgaccgcgtgatgcagttgcgcaacaactacgacaaggatgtgttcaacggc
gatctgggttatatccgggaggtggatacggaggacaggatgctgacggtggatttcgac
ggcaagaaggtcgagtacgatgtcacggaactcgacgaactgacgctggcctacgccacg
acgatccataaggcccaagggtcggaatacccgatcgtggtcatgccggtactgatgacc
cacttcgtgatgctccagcgcaacctgatctatacgggtattacgcgcgccaaaaagatc
tgcgtgctgatcggcgcaatgaaagccttggcctatgccgtccgcgatatgtccgtgctg
aaacgcaatacgagccttcgggagcggttgaatccctccctgacgaccgacgggaaactc
cggggctga
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