Alistipes onderdonkii subsp. vulgaris: A3BBH6_20310
Help
Entry
A3BBH6_20310 CDS
T06406
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aok
Alistipes onderdonkii subsp. vulgaris
Pathway
aok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3BBH6_20310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aok03019
]
A3BBH6_20310
Enzymes [BR:
aok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A3BBH6_20310
Messenger RNA biogenesis [BR:
aok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A3BBH6_20310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
NACHT
Motif
Other DBs
NCBI-ProteinID:
BBL01795
UniProt:
A0A4Y1WM36
LinkDB
All DBs
Position
complement(2433601..2435208)
Genome browser
AA seq
535 aa
AA seq
DB search
MTFQELNLIEPLKRAVAEKGYTTPTPIQQQAIPPALEGRDLMGCAQTGTGKTAAFTLPIL
QLLAAEPRTKGRRTIKALVLTPTRELAAQIDECCRDYARYTDIRHCVIFGGVNQRPQVDA
LQRGIDLLVATPGRLLDLIGQGYVSLADIRFFVLDEADRMLDMGFIHDIRRILPLLPRER
QTLFFSATMPDDIVKLANTMLRNPAHVTVTPPASVVETIRQSVLFAEKAEKRTLLASLLR
ERPESSVLVFSRTKHGADRIARILTKAGIEGRAIHGDKSQGARERAMNDFRSGACRVLIA
TDIAARGIDISELPLVINYDLPEVPETYVHRIGRTGRAGRDGQAIAFCSEEERPLLKDIL
KLTGLELDPDSGELAPAQNSRKKPAGKKPDTAQTGGQKQAEEKRAAQKQPAQSQAGQRPG
RRKPQGQAPGDPKPQGQRTGGKQTPDGQQPQDKDAAARPARRRNRNRGRQKPDRQNAAAA
NTERRQDDRKSGSQKSARDKREAVSPEAPRKAQAPEKKKSGMGSWLSGILRPGRK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgacattccaggaactgaacctgatagaaccactcaagcgtgccgtggccgaaaaaggc
tacacgacccccactccgatccagcaacaagccatcccgcccgcactcgaaggccgcgac
ctgatgggctgcgcccagaccgggacgggcaagacggcggccttcacgctgccgatcctc
caattgctcgcggccgagccgcgcaccaaagggcggcgcacgatcaaggcgctggtgctc
acgccgacgcgcgaactggccgcccagatcgacgaatgctgccgcgactatgcccgctac
acggacatccgccactgcgtgatcttcggcggcgtcaaccagcggccgcaggtcgatgcg
ctgcaacgcggcatcgacctgctggtagccacgccgggacgcctgctcgacctgatcggc
cagggttacgtctcgctcgccgacatccgcttcttcgtcctcgacgaagccgaccggatg
ctcgacatgggtttcatccacgacatccggcgaatcctcccgctgctgccccgcgagcgg
caaacgctcttcttctcggcgacgatgcccgacgacatcgtaaaactggccaatacgatg
ctccgcaacccggcgcacgtcaccgtgacacccccggcctcggtggtcgagaccatccgc
cagagcgtcctgttcgccgaaaaggccgaaaaacggacgctgctggcctccctgctgcgc
gaacgccccgagagctcggtgctggtattttcgcgcaccaagcacggcgccgaccgcatc
gcccgtatcctcaccaaagcgggcatcgaaggacgcgccatccacggagacaagtcgcag
ggcgcccgcgaacgggccatgaacgactttcgctcgggagcctgccgggtgctgatcgcc
accgacatcgccgcgcggggaatcgacatcagcgaactgccgctggtaatcaactacgac
ctgccggaagtgcccgagacctatgtccaccgcatcggccgcacgggacgcgccgggcgc
gacggacaggccatcgccttctgctcggaggaggaacgcccgctgctgaaagacatcctc
aaactgaccggactggaactcgacccggattccggggaactggctcccgcacaaaacagc
cggaaaaagcccgccgggaaaaaaccggatacagcacaaaccggagggcagaagcaagcg
gaggaaaagcgagccgcacaaaaacagcccgcacaaagtcaggccggacagaggccgggt
aggcgcaagccgcagggacaggcacccggcgatccgaaaccgcaggggcaacgaactggc
ggcaagcagaccccggacgggcaacagccgcaggacaaggacgccgcggcacgcccggca
cgccgccgcaaccgtaaccggggcaggcaaaaaccggacaggcaaaacgcagcggccgca
aacacggaacggagacaggatgaccgaaaatccggaagtcagaaatccgcccgggacaaa
cgggaagcggtaagccccgaggcaccccgaaaagcgcaggcgccggagaagaaaaagtcc
ggcatgggcagctggctgtccggcatcctcaggccgggccgcaaataa
DBGET
integrated database retrieval system
