Alistipes onderdonkii subsp. vulgaris: A3BBH6_27050
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Entry
A3BBH6_27050 CDS
T06406
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aok
Alistipes onderdonkii subsp. vulgaris
Brite
KEGG Orthology (KO) [BR:
aok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aok03032
]
A3BBH6_27050 (gyrB)
03400 DNA repair and recombination proteins [BR:
aok03400
]
A3BBH6_27050 (gyrB)
Enzymes [BR:
aok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A3BBH6_27050 (gyrB)
DNA replication proteins [BR:
aok03032
]
Prokaryotic type
DNA Topoisomerases
A3BBH6_27050 (gyrB)
DNA repair and recombination proteins [BR:
aok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A3BBH6_27050 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
AAA_21
DUF1932
Motif
Other DBs
NCBI-ProteinID:
BBL02469
LinkDB
All DBs
Position
complement(3226586..3228544)
Genome browser
AA seq
652 aa
AA seq
DB search
MSTELENVKKQEEEYSASNIQVLEGLEAVRKRPAMYIGDIGEKGLHHLVYEVVDNSIDEA
LAGYCTDIDVTINEDNSITVRDNGRGIPTDYHEKEGKSALEVVLTVLHAGGKFDKGSYKV
SGGLHGVGVSCVNALSTLLIAEIRSRDGKIYRQTYSKGAPTSQVEVIGECSDRGTTITFK
PDESIFTLTTEYKYDILANRLRELAFLNKGIRLNLYDKRRDDEGNTREDHFYSEEGLKEF
VQYLDATRGTPIIDQIIYLDTEKNGVPVEVAMQYNDSFSENVHSYVNNINTIEGGTHLTG
FRRALTRTLKKYAEDSGMLAKLKFDINGDDFREGLTAVVSVKVQEPQFEGQTKTKLGNDE
VSAAVDQAMSAALGHYLEENPKDAKAIVQKVILAATARHAARHAREMVQRKTVLSGAGLP
GKLADCSSRDRSIAEIFFVEGDSAGGTAKSGRDRNFQAIMPLRGKILNIEKAQEHRMWEN
EEIKNMFTALGVTIGTEEDSKALNLEKLRYDKIIIMTDADVDGSHIATLMLTFFFRKMKE
LIENGHVYIATPPLYLVKKGKQERYCWTEKERDTITAEFGKGAHVQRYKGLGEMNAHQLW
ETTMNPDTRILRQVNIENAAEADRIFSMLMGDEVPPRREFIEKNAHYANIDA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgaattagaaaacgtaaaaaagcaagaagaagaatattccgcttcgaatatc
caggttctcgaagggcttgaggcggtgcgcaagcgccccgccatgtatatcggcgacata
ggcgagaagggcctgcaccatctggtctacgaggtggtcgacaactcgatcgacgaggcg
ctggcgggctattgcaccgacatcgacgtgacgatcaacgaggacaactccatcaccgta
cgcgacaacggccgcggcatcccgaccgactaccacgaaaaggagggtaaatcggcactc
gaagtcgtgcttacggttctccatgcgggcggtaagttcgacaagggcagctacaaggtc
tcgggcggcctgcacggcgtgggcgtatcgtgcgtgaacgcactttcgacgctgctgatc
gccgagatccgcagccgcgacgggaaaatataccgccagacgtacagcaagggcgctccc
acctcgcaggtcgaggtcatcggcgaatgctccgaccgcggcaccaccatcacgttcaaa
cccgacgagagcatcttcacgctcacgacggaatacaaatacgacatcctggccaaccgc
ctgcgcgaactggcgttcctgaacaagggcatccgcctgaacctctacgataagcgcagg
gacgacgaaggcaatacccgcgaagaccacttctattcggaagagggcctcaaggagttc
gtccagtacctcgacgccacgcgcggcacgccgatcatcgaccagatcatctacctcgat
accgaaaagaacggcgtcccggtcgaggtggccatgcagtacaacgactcgttctcggag
aacgtgcactcctatgtaaataacatcaacaccatcgagggcggtacgcacctgacgggc
ttccgccgcgcgctgacccgtacgctcaagaaatacgccgaggattcgggtatgctcgcc
aaactgaagttcgacatcaacggcgacgacttccgcgaggggctcacagccgtggtttcg
gtgaaggtgcaggagccgcagttcgaaggccagaccaagaccaaactgggcaacgacgag
gtctcggccgccgtagaccaggcgatgtccgccgccctgggccactacctggaggaaaac
cccaaggatgccaaggccatcgtgcagaaagtcatcctggctgcgacggcgcgccacgcg
gcacgccacgcccgtgaaatggtgcagcgcaagaccgtactttcgggagccgggctcccc
ggcaaactcgccgactgttcgagccgcgaccgttcgatcgccgaaatcttcttcgtcgag
ggtgactcggcaggcggcacggccaaatcgggccgcgaccgtaatttccaggccatcatg
ccgctgcgcggtaagatcctgaacatcgaaaaggcgcaggagcaccgcatgtgggagaac
gaggagatcaagaacatgttcacggcgctgggtgtgacgatcggcaccgaggaggacagc
aaggcgctcaacctggagaaactccgctacgacaagatcatcatcatgaccgatgccgac
gtcgacggcagccacatcgcgacgctgatgctgacgttcttcttccgcaagatgaaggag
ctgatcgagaacggccacgtctacatcgccaccccgcccctctacctcgtgaagaaaggc
aagcaggagcgctattgctggacggagaaggaacgcgacaccatcaccgccgaattcggc
aagggggcgcacgtgcagcgttacaaaggtctcggcgagatgaacgcccaccagctgtgg
gaaacgacgatgaaccccgacacgcgcatcctgcgccaggtgaacatcgaaaacgctgcc
gaggcagaccgcatcttctcgatgctgatgggtgacgaagtgccgccccgacgcgaattc
atcgagaaaaacgcgcattacgcaaatatcgacgcataa
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