Alistipes onderdonkii subsp. vulgaris: A3BBH6_29100
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Entry
A3BBH6_29100 CDS
T06406
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aok
Alistipes onderdonkii subsp. vulgaris
Brite
KEGG Orthology (KO) [BR:
aok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aok03016
]
A3BBH6_29100 (truA)
Enzymes [BR:
aok01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
A3BBH6_29100 (truA)
Transfer RNA biogenesis [BR:
aok03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A3BBH6_29100 (truA)
Prokaryotic type
A3BBH6_29100 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BBL02674
LinkDB
All DBs
Position
complement(3490393..3491157)
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AA seq
254 aa
AA seq
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MRYFLELRYNGAAYCGWQRQPDMPSVQQTLERALATLLREKIEVTGAGRTDTGVNASYYV
AHFDCAAPVPDPAQTVYKLNFLLPGDIAVGSMTPVDDGAHARFAAREREYRYYIEPRKNP
FTRGTTWQYYVPLDVGRMNEAAASLLRYDDFTSFAKLNSNNKTNICRVMHAAWTVDGQGV
LCFTIRADRFLRNMVRSLVGTLVDVGRGRYSPQQFREIVESRDLSRSSGGAPAQGLFLSD
VVYPADVFERKVFY
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcgctattttctggaactcaggtacaacggggccgcctattgcggctggcagcggcag
cccgacatgccgtcggtgcagcagacgctcgagcgggcgctcgctaccctgttgcgcgag
aaaatcgaggtgacgggggcggggcgtaccgatacgggtgtcaacgcctcctattatgtg
gcgcatttcgattgtgcggcccccgtgcccgatccggcgcagacggtctacaaactgaat
ttcctgctgccgggggacattgccgtgggaagcatgacgcccgtggacgacggtgcgcac
gcccgtttcgcggcgcgcgagcgcgaataccgctactacatcgagccgcgcaagaaccct
tttacgcggggcacgacgtggcagtattacgtgccgctggatgtcgggcggatgaacgag
gcggcggcatcgctgctgcgctacgacgattttacgtcgttcgccaagctcaattcgaac
aacaagaccaacatctgccgcgtcatgcacgcggcatggacggtcgacgggcagggcgtg
ctctgctttacgatccgtgccgaccgtttcctgcgcaacatggtgaggtcgctggtcggg
acgctggtcgacgtggggcgcgggcgttatagcccgcagcagttccgcgagatcgttgaa
agccgcgacttgtcgcgctcgagcggcggcgcccctgcgcaggggcttttcctgagcgac
gtggtctatccggcggacgtgtttgaacgtaaggtattttactga
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