Bradyrhizobium oligotrophicum: S58_00910
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Entry
S58_00910 CDS
T02484
Name
(GenBank) putative helicase-exonuclease type V protein family, AddA subunit
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
aol
Bradyrhizobium oligotrophicum
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aol03400
]
S58_00910
Enzymes [BR:
aol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
S58_00910
DNA repair and recombination proteins [BR:
aol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
S58_00910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_19
DEAD
DUF3638
Motif
Other DBs
NCBI-ProteinID:
BAM86112
UniProt:
M4Z0F0
LinkDB
All DBs
Position
101668..105141
Genome browser
AA seq
1157 aa
AA seq
DB search
MVKAPRPIPAAVSEAQTRASNPAASAFVSANAGSGKTHVLVQRVIRLLLDGVPPEKILCI
TFTKAAAANMAERVFSTLGHWVTLDDDALDGAIRSTGILQSDKKLRAAARKLFASALETP
GGLKVQTIHALCTRLLQQFPFEANVPARFSVLDDRDQTEMMERANLKVMLDAARAPDSAV
GRALQVAMANAADSTFKEVVREACLSRDHFMAWTDGAGRVEVAAQHLGEVLGIGADETLE
AIERDILDGPNLPRADWTEIAARLDGGAKTDQKQADQLRAALAFSGSDQVDEYLRVFLTD
DKEPRKSVLTKKFAESNPGLAGLFDSEARRLDRLIEKRRAAVVRDRTEALLQIATAAAAN
YRREKQERGLLDYDDLIDKTLAMLNRVSAGWVHYKLDRGVDHVLIDEAQDTSPRQWDIVA
HIIEEFTAGAGARDGLTRTIFAVGDEKQSIFSFQGADPHEFDARRRQLQQRFTDAGLLFD
PVSFTYSFRSGPTVLHAVDHVFREREVYSSIHSPDIGYPIHNALTDAGPSLVELWSLSER
DDRKEIEGWRAPFDGVSVTSPEVKLSRRIQAEIKRLIQTGTMTGHDRARRRLSYGDMLIL
VRRRGNAFDAVIQALKHAGIPVAGADRLKLTEHIAIIDLMNLADALLLPQDDLALATALK
SPLFGLDDDDLFKLAWQRRGSLREALAAQAAGDERLQAVVRRLQQCERRAAEDTPFAFYA
WLLGGDGGRRRILARLGHEANDALDEFLELALSYERKAPASLQGFVAWLRAADTEVKRDM
EISRDEIRVMTVHGAKGLEASVVFLVDTTSSPSDSQRLRLIHVPHGEQEIVVWAGRKADD
PQAVVAARAAMLKDTEDEYRRLLYVAMTRAADRLVIGGCMPGNMNNVRGGSWYDLMARGL
EAAGLEVEVIETEDGPVKRYARAEDIAETAKDEARRMVETAVALPAWLRTAAAESPADVA
VLRPSDPSGEERPVRTGESLAARSLAMQRGTLVHRLLQSLPDVLPERRRDAALRYLLRNA
PDWPEDERERLAARVLGVIEDTRFAAVFAAGSRAEVSIVGRLALAGQPPALVSGQIDRLV
VTEAAVLIVDFKTNQQPASTLAEVPPAYVRQLALYRAVLGQLYPGRTVRAALLWTETAEF
MELPVSALDAMLPSQHV
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggcgccccgccccattcccgcagccgtgagcgaggcgcagacgcgcgcgtcg
aacccggcggcgtcagcgttcgtgtccgccaatgccggctcgggcaagacgcatgtgctg
gtgcagcgcgtgatccggctgctgctcgacggcgtgccgccggagaagatcctctgcatc
accttcaccaaggccgccgccgccaacatggccgagcgcgtgttctcgacgctcggccat
tgggtgacgctcgacgacgacgcactcgacggcgccatcagatcgacgggcattctacag
tccgacaagaagctgcgcgcggcggcgcgcaagctgtttgccagcgcgctggagacgccg
ggcgggctgaaggtgcagaccatccacgcgctgtgcacacggttgctgcagcagtttccg
ttcgaggccaacgtaccggcacggttctcggtgctcgacgaccgcgaccagaccgagatg
atggagcgcgccaatctcaaggtgatgctcgacgcggcgcgcgcgccggacagcgcggtc
ggccgcgcgctgcaggtggcgatggccaatgcggccgattcgaccttcaaggaggtcgtg
cgcgaggcctgtctcagccgtgatcacttcatggcctggacagacggcgccggccgtgtc
gaagtcgccgcgcagcatctcggcgaggtgctcggcatcggcgccgatgagacgctggag
gcgatcgagcgcgacatcctcgatggtcccaatctgccccgcgcggattggaccgagatt
gccgcgcggctcgacggcggcgccaagaccgaccagaagcaggccgatcagttgcgcgcg
gcgctcgcgttctcgggcagcgatcaggtcgacgaatatcttcgcgtgttcctcaccgat
gacaaggagccgcgcaaatcggtgctgaccaagaagttcgccgagagcaatccaggcctc
gccgggctgttcgactcggaggcacgccggctcgatcgtctgatcgagaagcgccgcgcc
gccgtcgtgcgcgaccgcaccgaggcgctgttgcagatcgcgaccgccgcggccgcgaac
tatcgccgcgagaagcaggagcgcgggctgctcgactatgacgacctgatcgacaagacg
ctggcgatgctcaaccgcgtctcggccggctgggtgcactacaagctcgaccgcggcgtc
gatcacgtgctgatcgacgaggcgcaggacaccagcccgcggcaatgggacatcgtcgcc
cacatcatcgaggagttcaccgccggcgccggcgcgcgcgacgggctgacgcgcacgatc
ttcgcggtcggcgacgagaagcagtcgatcttctcgttccagggcgccgatccgcacgag
ttcgatgcgcgccgtcgccagctgcagcagcgcttcaccgatgccgggctgctgttcgat
ccggtgtccttcacctattcgttccgctccggcccgacggtgctgcacgcggtcgatcac
gtattccgcgagcgcgaggtctacagcagcatccattcgcccgatatcggctaccccatc
cacaacgcgttgaccgatgccgggccgagcctggtcgagctgtggagtctcagcgagcgc
gacgaccgcaaggagatcgagggctggcgcgcgccgttcgacggcgtctcggtgacgagt
cccgaggtgaagctgtcgcgccgcatccaggccgagatcaagcggctgatccagacgggc
acgatgaccggtcatgatcgtgcgcggcggcggctgagctatggcgacatgctgatcctg
gtgcgccggcgcggcaatgcgttcgacgcggtgatccaggcgctgaagcatgccggcatc
cccgtggccggcgccgaccggctgaagctgaccgagcacatcgccatcatcgacctcatg
aaccttgccgacgcgctgctgctgccgcaggacgatctggcgttggccaccgcgctgaag
agcccgctgttcgggctcgacgatgacgacctgttcaagctggcttggcagcgccgcggg
tctctgcgcgaggcgctcgccgcgcaggccgctggtgacgagcggctgcaggcggtggtg
cgccgactgcagcaatgcgagcgtcgcgccgccgaggatacgccgttcgcgttctatgcc
tggctgctcggcggcgacggcggacggcgccgcatcctggcgcggctcggccacgaggcc
aacgacgcgctcgacgaatttctcgagttggcgctgtcctatgagcgcaaggcgccggcc
tcgctgcagggcttcgtcgcgtggctgcgcgcggccgataccgaggtgaagcgcgacatg
gagatttcgcgcgacgagatccgagtgatgaccgtgcacggcgccaagggcctcgaggcc
tcggtcgtgttcctggtcgacacgacctcctcgccttcggattcgcagcggctgcggctg
atccacgtgccgcatggcgagcaggagatcgtggtctgggccggacgcaaggccgacgat
ccgcaagccgtggtcgcggcgcgcgcggcaatgctcaaggacaccgaggacgagtatcgc
cggctgctgtacgtcgcgatgacccgcgccgccgaccggctcgtgatcggcggctgcatg
ccgggcaacatgaacaatgtccgcggcggcagctggtacgacctgatggcacgcgggcta
gaagccgcgggcctcgaggtcgaggtgatcgaaaccgaggacggtcccgtgaagcgctat
gcgcgggccgaggatatcgccgagaccgcgaaagacgaggcgcggcgcatggtggagacg
gcagtcgcgctgccggcctggctgcggacggcggcagcggagagccccgctgatgtcgct
gtgctgaggccgtccgatccctccggcgaggagcgtccggtgcgcacgggcgaatcactg
gcggcgcgcagtcttgcgatgcagcgcggtacattggtgcaccgcctgctgcagtcgctg
ccggatgtgctgccggagcggcgccgcgacgcggcgttgcggtatctgttgcgcaatgcc
cccgattggccggaggacgagcgggagcggctcgcggcgcgcgtcctcggcgtgatcgaa
gacacgcgctttgccgcggtgttcgcggccggcagccgcgcggaggtgtcgatcgtcggc
cggctcgcgctggcggggcaaccgccggcgctggtgtcgggtcagatcgaccgcctggtc
gtgaccgaggccgcggtgctgatcgtcgacttcaagaccaatcagcagccggcttcgact
ctcgccgaggtgccaccagcctatgtccgccagctcgcgctgtaccgcgccgtgctcggc
caattgtaccccggcaggaccgtccgcgccgccctgctctggaccgaaaccgctgaattc
atggagcttcccgtctccgcgctggacgccatgctgccatcccagcacgtctga
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