Bradyrhizobium oligotrophicum: S58_01220
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Entry
S58_01220 CDS
T02484
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
aol
Bradyrhizobium oligotrophicum
Pathway
aol02020
Two-component system
aol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
S58_01220
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
S58_01220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aol03021
]
S58_01220
Transcription machinery [BR:
aol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
S58_01220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
BAM86142
UniProt:
M4Z0H6
LinkDB
All DBs
Position
complement(130626..132266)
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AA seq
546 aa
AA seq
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MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLSTFVEEELERNPLLERAADGPETPV
AGEQQMSERAEFSEGSESGGEDFGEGGGSSGGESFEGAQDDWMSRDLGTRTEIEQTLDSG
LENVFSEEPAEAAARTAQDAAPTTYTEWGGGASGDEDYNLEAFVAAETTLSDHLAEQAAV
AFIAPADRMIGQYLIDLVDEAGYLPADLGQAADRLGAEQADVDAVLGVLQTFDPPGICAR
NLSECLAIQLRELDRYDPAMQALVEHLDLLAKRDFVNLRKLCGVDDEDLVDMIGEIRRLD
PKPGLKFGTTRTQTMVPDVYVRPGPDGGWLVELNSDTLPRVLVNQVYYSELSKTIRKDGD
KSYFTDCLQNATWLVRALDQRARTILKVATEIVRQQDGFFTHGVAHLRPLNLKAVADAIQ
MHESTVSRVTANKYMATNRGTFELKYFFTASIASADGGEAHSAEAVRHHIKQLIDAEEPS
AILSDDTIVEKLRAAGIDIARRTVAKYREAMRIPSSVQRRRDKQSMLAHALSAPAGVDRT
RDTASV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgacgcagagattagaattccgccagtcgcagtcgctggtgatgacgccgcag
ctgatgcaggcgatcaagctgctgcagctgtccaacctcgacctctccacgttcgtcgaa
gaagagctggagcgcaatccgctgctggagcgcgcggccgatggcccggaaacgccggtg
gccggcgagcagcagatgtccgagcgcgccgaattctcggaaggtagcgagagcggcggc
gaagatttcggcgagggcggcggcagcagcggcggcgagagcttcgagggcgcccaggac
gactggatgagccgcgacctcggcacccgtacggagatcgaacagacgctcgattccggg
ctcgaaaacgtgttctccgaggagcctgcggaagcggcggcacgcactgcgcaggacgcc
gcgcccaccacctacaccgaatggggcggcggcgcctcgggtgacgaggactacaatctc
gaagccttcgtcgcggccgagaccacgctgtcggatcatctcgccgagcaggcggcggtg
gccttcatcgcgccggccgaccgcatgatcggccagtacctgatcgatctcgtcgacgag
gccggctatctgccggccgatctcggccaggccgccgaccggctcggcgccgagcaggcc
gatgtcgacgcggtgctcggcgtgctgcagacgttcgatccgcccggcatctgcgcgcgc
aatctgagcgaatgcctcgcgatccagctgcgcgagctcgaccgctacgatccggcaatg
caggcgctggtcgagcatctcgatctcctcgccaagcgcgacttcgtgaacttgcgcaag
ctgtgcggcgtcgacgacgaggatctggtcgacatgatcggcgagatccgaaggctcgat
ccgaagcccggcctcaagttcggtaccacgcgcacgcagaccatggtgcccgacgtctat
gtgcgtcccggtcccgatggcggctggctggtcgagctcaacagcgacacgctgccgcgc
gtcctggtgaaccaggtctattactccgaactgtcgaagacgatccgcaaggacggcgac
aaatcctacttcaccgactgcctgcagaatgcgacgtggctggtgcgcgcgctcgatcag
cgcgcgcgtacgatcctgaaagtggcgaccgagatcgtgcgccagcaggatggcttcttc
acgcacggtgtcgcgcatctgcggccgctgaatttgaaggccgttgcggatgcgatccag
atgcacgaatcgacggtgtcgcgcgtcaccgccaacaaatacatggcgaccaatcgcgga
actttcgagctgaaatatttcttcacggcctcgatcgcgtcggccgatggcggcgaggcg
cattcggcggaagccgtgcgtcatcacatcaagcagctgatcgatgcggaagaaccctcc
gcaattctctccgacgacaccatcgtggagaagctgcgcgccgccggcatcgacatcgcc
cgccgcacggtcgcgaaataccgggaggcgatgcggatcccgtcctcggtgcagcgccgc
cgggacaagcagagcatgctggcgcatgccctgtcggcgcccgccggcgtcgaccgcacc
cgcgataccgcgtcagtttga
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