KEGG   Bradyrhizobium oligotrophicum: S58_01220
Entry
S58_01220         CDS       T02484                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
aol  Bradyrhizobium oligotrophicum
Pathway
aol02020  Two-component system
aol02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:aol00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    S58_01220
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    S58_01220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aol03021]
    S58_01220
Transcription machinery [BR:aol03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     S58_01220
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: BAM86142
UniProt: M4Z0H6
LinkDB
Position
complement(130626..132266)
AA seq 546 aa
MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLSTFVEEELERNPLLERAADGPETPV
AGEQQMSERAEFSEGSESGGEDFGEGGGSSGGESFEGAQDDWMSRDLGTRTEIEQTLDSG
LENVFSEEPAEAAARTAQDAAPTTYTEWGGGASGDEDYNLEAFVAAETTLSDHLAEQAAV
AFIAPADRMIGQYLIDLVDEAGYLPADLGQAADRLGAEQADVDAVLGVLQTFDPPGICAR
NLSECLAIQLRELDRYDPAMQALVEHLDLLAKRDFVNLRKLCGVDDEDLVDMIGEIRRLD
PKPGLKFGTTRTQTMVPDVYVRPGPDGGWLVELNSDTLPRVLVNQVYYSELSKTIRKDGD
KSYFTDCLQNATWLVRALDQRARTILKVATEIVRQQDGFFTHGVAHLRPLNLKAVADAIQ
MHESTVSRVTANKYMATNRGTFELKYFFTASIASADGGEAHSAEAVRHHIKQLIDAEEPS
AILSDDTIVEKLRAAGIDIARRTVAKYREAMRIPSSVQRRRDKQSMLAHALSAPAGVDRT
RDTASV
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggcgttgacgcagagattagaattccgccagtcgcagtcgctggtgatgacgccgcag
ctgatgcaggcgatcaagctgctgcagctgtccaacctcgacctctccacgttcgtcgaa
gaagagctggagcgcaatccgctgctggagcgcgcggccgatggcccggaaacgccggtg
gccggcgagcagcagatgtccgagcgcgccgaattctcggaaggtagcgagagcggcggc
gaagatttcggcgagggcggcggcagcagcggcggcgagagcttcgagggcgcccaggac
gactggatgagccgcgacctcggcacccgtacggagatcgaacagacgctcgattccggg
ctcgaaaacgtgttctccgaggagcctgcggaagcggcggcacgcactgcgcaggacgcc
gcgcccaccacctacaccgaatggggcggcggcgcctcgggtgacgaggactacaatctc
gaagccttcgtcgcggccgagaccacgctgtcggatcatctcgccgagcaggcggcggtg
gccttcatcgcgccggccgaccgcatgatcggccagtacctgatcgatctcgtcgacgag
gccggctatctgccggccgatctcggccaggccgccgaccggctcggcgccgagcaggcc
gatgtcgacgcggtgctcggcgtgctgcagacgttcgatccgcccggcatctgcgcgcgc
aatctgagcgaatgcctcgcgatccagctgcgcgagctcgaccgctacgatccggcaatg
caggcgctggtcgagcatctcgatctcctcgccaagcgcgacttcgtgaacttgcgcaag
ctgtgcggcgtcgacgacgaggatctggtcgacatgatcggcgagatccgaaggctcgat
ccgaagcccggcctcaagttcggtaccacgcgcacgcagaccatggtgcccgacgtctat
gtgcgtcccggtcccgatggcggctggctggtcgagctcaacagcgacacgctgccgcgc
gtcctggtgaaccaggtctattactccgaactgtcgaagacgatccgcaaggacggcgac
aaatcctacttcaccgactgcctgcagaatgcgacgtggctggtgcgcgcgctcgatcag
cgcgcgcgtacgatcctgaaagtggcgaccgagatcgtgcgccagcaggatggcttcttc
acgcacggtgtcgcgcatctgcggccgctgaatttgaaggccgttgcggatgcgatccag
atgcacgaatcgacggtgtcgcgcgtcaccgccaacaaatacatggcgaccaatcgcgga
actttcgagctgaaatatttcttcacggcctcgatcgcgtcggccgatggcggcgaggcg
cattcggcggaagccgtgcgtcatcacatcaagcagctgatcgatgcggaagaaccctcc
gcaattctctccgacgacaccatcgtggagaagctgcgcgccgccggcatcgacatcgcc
cgccgcacggtcgcgaaataccgggaggcgatgcggatcccgtcctcggtgcagcgccgc
cgggacaagcagagcatgctggcgcatgccctgtcggcgcccgccggcgtcgaccgcacc
cgcgataccgcgtcagtttga

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