Bradyrhizobium oligotrophicum: S58_03470
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Entry
S58_03470 CDS
T02484
Symbol
ramB
Name
(GenBank) putative ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
aol
Bradyrhizobium oligotrophicum
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aol03009
]
S58_03470 (ramB)
Enzymes [BR:
aol01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
S58_03470 (ramB)
Ribosome biogenesis [BR:
aol03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
S58_03470 (ramB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
Methyltransf_11
Methyltransf_31
FtsJ
RsmF-B_ferredox
ApbA
Cons_hypoth95
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
BAM86363
UniProt:
M4Z048
LinkDB
All DBs
Position
complement(367162..368514)
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AA seq
450 aa
AA seq
DB search
MPPPRFATPSEVPGLAARRIAADVIDGVLHKHRTLDDQLDGTGAHPGLKHLADRDRALMR
RLVATTLRRLGTLGHVLSRLLDRGVPTDAPRAQSALLIGAAQILWMDVPDHAAVDLSVRL
VQADRRAAKYAGLVNAVLRRCAREGTALLDDAQGQPLDIAPWLLKRWIDHYGEATAKDIA
AALGQEPSLDLTVKSDPPQWATRLHGEVLPTGTVRTLLHGSVTVLPGFAEGQWWVQDAAA
ALPARLLGDVTGKTIADLCAAPGGKTAQLAHGGARVTAVDRSQARMSRLKDNMTRLQLVA
ETVVADAAEWQPADAGGFDGILVDAPCTSTGTIRRHPDVGWLRSEADIASLSGLQARLLS
RAAGLLKPGGTLVYCTCSLEPEEGEQVVENVLAATTELRRIPITPGEVAGLTELVTPVGD
LRTLPCHLPHQDPRLGGLDGFYAARLERRP
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgccgcgatttgcgaccccatccgaagttcccggccttgcggcacggcgtatt
gccgccgacgtcatcgacggcgtcctgcataagcaccgtacgctcgacgaccagctcgac
ggcaccggtgcgcatcccggactgaagcatctcgccgatcgcgaccgcgccctgatgcgc
cgcttggtggcgaccaccttacggcgtctcggcaccctcggccacgtgctgtcgcgcctg
ttggatcgcggcgttccaaccgacgcgccgcgggcgcagagcgcgctcctgatcggcgcg
gcccagatcctgtggatggacgttcccgaccatgccgcggtcgacctgtcggtccggctg
gtgcaggccgaccggcgcgccgccaaatatgccgggctcgtcaacgccgtgctgcgccgc
tgcgcgcgcgagggaacggccctgctcgacgatgcccagggccagccgctcgacatcgcg
ccctggctgctgaagcgctggatcgatcattacggcgaggcgacggcgaaagacattgct
gctgcgctcggccaggaaccgtcgctcgacctcaccgtcaagtcggacccgccacaatgg
gcgacacggctgcatggcgaggttctcccgaccggcacggtgcgcacgctgctgcatggc
tcggtgacggtgctgccgggctttgccgagggccaatggtgggtccaggacgccgcggcc
gccctccccgcccgcctgctcggcgacgtcaccggcaagaccatcgccgacctctgcgct
gcgccgggcggcaagaccgcccagctcgcccatggcggcgcccgcgtcaccgcggtcgac
cgctcgcaggcccggatgagccggctgaaggacaacatgacccggctgcagctcgtggcc
gaaacggtcgtggccgacgccgccgagtggcagccggcagacgccggcggctttgacggc
attctggtcgatgcgccctgcacctcgaccggcaccatccgccgccacccggatgtgggc
tggctgcggagcgaagccgacatcgcgtccctgtcgggcctgcaggcccggctgctgtcc
cgagcggccggcctgctgaagccgggcggcaccctggtctattgtacctgctcgctggag
cccgaagagggcgagcaggtggtcgagaatgtcctcgccgcaaccaccgagctgcgccgg
atcccgatcacccccggcgaggtggcgggcctgaccgagctcgtcactcccgtgggcgat
ctgcgaacgctgccctgccatctgccgcatcaggatccgcggctcggcgggctcgacggt
ttttatgcggcgagactggagcggcggccgtga
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