Bradyrhizobium oligotrophicum: S58_13820
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Entry
S58_13820 CDS
T02484
Name
(GenBank) sigma D (sigma 70) factor of RNA polymerase
KO
K03086
RNA polymerase primary sigma factor
Organism
aol
Bradyrhizobium oligotrophicum
Pathway
aol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
S58_13820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aol03021
]
S58_13820
Transcription machinery [BR:
aol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
S58_13820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BAM87391
UniProt:
M4Z3G4
LinkDB
All DBs
Position
1567244..1569355
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AA seq
703 aa
AA seq
DB search
MATKAKTLQVKDKEKDDKAADAPEKDAADAPSPLLDLSDAAVKKMIKQAKKRGFVTFDQL
NEVLPSDTTSPEQIEDIMSMLSDMGINVTEAEEADDSDEKDDGEDETDNELVEITQKAVT
EVKKSEPGERTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQA
IIIWRDELNEGKIFLRDIIDLEATYAGPEAKGGMNPQIAAPVNGEGAPAEGGEIQAAVAP
PAAPQQPTPFRAAPNGAPATEEKDPGEAAAEADMDDDEFENQMSLAAIEAELKPKVVETF
DKIASEYKKLRRLQEQDIANQLQSESLSPSQERKYKKLKDEIIVEVKSLRLNQARIDSLV
EQLYDINKKLVSFEGRLMRLADSHGVGREDFLRNYQGSELDPRWLNRVSKLSAKGWKNFV
HYEKDRIKDLRQEVQSMAALTGLEIGEFRKIVHSVQKGEREARQAKKEMVEANLRLVISI
AKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI
RIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLKIAKEPLSLETP
VGDEEDSHLGDFIEDKNAILPIDAAIQSNLRETTTRVLASLTPREERVLRMRFGIGMNTD
HTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaaggcaaagacgctgcaggtgaaggacaaggaaaaggacgacaaggcggcc
gacgctcccgagaaggacgccgccgatgcgccttcgccgttgctcgatttgtcggacgcc
gccgtcaagaagatgatcaagcaggccaagaagcgcggcttcgtgacctttgatcagctc
aacgaggtcctgccttccgacaccacctcgccggaacagatcgaagacatcatgtcgatg
ctctccgacatgggcatcaacgtgaccgaggccgaagaggccgacgattccgacgaaaag
gacgacggcgaggacgagaccgacaacgagctcgtcgagatcacccagaaggccgtcacc
gaggtcaagaagtccgagcccggcgagcgcaccgacgatcccgtgcgcatgtatctgcgc
gagatgggcaccgtcgagctgctgtcgcgcgagggcgaaatcgccatcgccaagcggatc
gaggccggccgcgaggcgatgatcgcagggctctgcgaaagcccgctgaccttccaggcc
atcatcatctggcgtgacgagctcaacgaaggcaagatcttccttcgcgacatcatcgat
ctcgaagccacctatgccggccccgaagccaagggcggcatgaatccgcagatcgcagcg
ccggtgaacggcgagggcgctccggccgagggcggcgagatccaggccgcggtcgcgccg
ccggccgccccgcagcagccgaccccgttccgggccgcgccgaacggcgcgcccgccacc
gaggaaaaagatcccggcgaggctgcggccgaagccgacatggacgacgacgagttcgag
aaccagatgtcgctcgccgccatcgaggccgagctgaagccgaaggtggtcgagaccttc
gacaagatcgcgtccgagtacaagaagctgcgccgcctgcaggagcaggacatcgccaac
cagctgcagagcgagtcgctgtcgccctcgcaggagcgcaagtacaagaagctcaaggac
gagatcatcgtcgaggtgaagtcgctgcgcctcaaccaggcccgcatcgactcactcgtc
gagcagctctacgacatcaacaagaagctggtctcgttcgagggccgcttgatgcggctg
gccgattctcacggcgtcgggcgcgaggatttcctgcgcaactaccagggctcggagctc
gatccgcgctggctcaatcgcgtctcgaaactctcggccaagggctggaagaacttcgtc
cattacgagaaggaccgcatcaaggatctgcgccaggaggtgcagtcgatggccgccctg
acgggtctggaaatcggcgaattccgcaagatcgtgcactcggtgcagaagggcgagcgc
gaggcccgtcaggccaagaaggagatggtggaagccaacctccgtctcgtgatctcgatc
gccaagaagtacaccaaccgcggcctgcagttcctcgacctgatccaggaaggcaacatc
ggcctgatgaaggcggtcgacaagttcgagtaccgccgcggctacaagttctcgacctac
gccacctggtggatccggcaggcgatcacccgctcgatcgccgaccaggcccgcaccatc
cgcatccccgtgcacatgatcgagacgatcaacaagatcgtccgcacctcgcgccagatg
ctgaacgagatcggccgcgagccgaccccggaggagctcgccgaaaagctcggcatgccc
ttggagaaggtgcgcaaggtcctcaagatcgccaaggagccgctctcgctcgaaaccccc
gtgggtgacgaggaggactctcatctcggcgacttcatcgaggacaagaacgcgatcctg
ccgatcgacgccgccatccagtccaacctgcgcgaaaccaccacccgcgtgctcgcctcg
ctgaccccgcgcgaagaacgcgtgctccgcatgcgcttcggcatcggcatgaacaccgac
cacaccctggaagaagtcggccagcagttctcggtgaccagagagcgtatccgccagatt
gaagcgaaggcgctgaggaagctgaagcatccgtcgaggtcgcggaagctgcggagcttc
ttggataattga
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