Bradyrhizobium oligotrophicum: S58_14620
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Entry
S58_14620 CDS
T02484
Name
(GenBank) sigma-54-dependent transcriptional regulator HTH Fis-type family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
aol
Bradyrhizobium oligotrophicum
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aol03000
]
S58_14620
Transcription factors [BR:
aol03000
]
Prokaryotic type
Helix-turn-helix
Other families
S58_14620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
HTH_23
HTH_30
HTH_7
HTH_28
AAA_5
AAA
HTH_29
PAS_4
HTH_22
HTH_Tnp_1
HVO_A0261_N
AAA_2
PAS_8
PAS
PAS_7
Sigma70_r4
NUMOD1
HTH_17
AAA_16
HTH_38
HTH_Tnp_IS630
HTH_36
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BAM87470
UniProt:
M4ZMK9
LinkDB
All DBs
Position
complement(1679178..1681058)
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AA seq
626 aa
AA seq
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MLPASRRVDGAWMKLDDHGHLPADVLSADIYDSWMRCIGLGLDALRPPSPEFVDAAVLRQ
EQQRCSLVRGLALAEMHTLHQQIAGSNFMIAFATAEGLLLDIISDSSFSCASDAACIRAG
AIWTETICGTNGLGTAAYLKRPIVVHGREHFFARYNNLTCVAAPIFAPDGEVAGILDASS
DCMSRQAHTQALVAMAATQIENGLFREQHRGNILIAFHNRGEYLHTLSAGLLAVDNDGQI
LAANRAARVLLHGLPASAGRRFGDVFRARFSDFVDEGRRNERQRLEDDVGSQFVATIENT
RQFPMTHRLPAPRPAPPKPTATTFVSADSRIAAIVQRVAVAAARKMPILIRGETGTGKEQ
MARHAHAASRRTGSFVAVNCAALPDSLIEAELFGYTEGAFTGARKGGSVGLFKEADGGTL
FLDEIGDMPVTLQAVLLRFLDDWTVRPVGGSKREVDVLLVSATNADLDDAIARGRFRSDL
LFRLNTLEVTLLPLRERTDFAELARHLMQKIDPSIGLSEAAIARLAQRDWDGNIRELRNV
LARLSLHETGPVIDAAAVSSLIAPGRPERAPTKATADDRAPADLHEIQRAHVLNTYSETG
HNISKTARRLGISRNTVYRALRGKPG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgctgccagccagccggcgcgtcgacggcgcgtggatgaagctcgacgatcacggccat
ctgccggccgatgtgctgtcggccgacatctacgacagctggatgcgctgcatcggcctc
ggcctcgatgcgctgcgtccgccctcgcccgaattcgtcgacgcggcggtgctgcggcag
gagcagcagcgctgctcgctggtgcgcggcctggcgctcgccgaaatgcacacgctgcac
cagcagatcgccggctccaatttcatgatcgcgttcgccaccgcagagggactgctgctc
gacatcatctcggactccagcttcagctgcgcatcggatgcggcctgcatccgcgccggc
gcgatctggaccgagacgatctgcggcaccaacgggctcggcaccgcggcctatctcaag
cggccgatcgtcgtgcatggccgcgagcacttcttcgcccgctacaacaatctgacctgc
gtggcggcgccgatcttcgcgccggacggcgaggtcgccggcatcctcgacgcatcctcc
gactgcatgtcgcgccaggcccacacccaggcgctggtcgcgatggccgcgacgcagatc
gagaacggcctgttccgcgagcagcatcgcggcaacatcctgatcgccttccacaaccgc
ggcgaatatctgcacacgctcagcgccgggctgctcgcggtcgacaatgacggccagatc
ctcgccgccaaccgcgccgcgcgcgtgctgctgcacgggctgccggcctcggcggggcgc
cgcttcggcgacgtgttccgcgcgcgcttcagcgacttcgtcgacgagggccggcgcaac
gagcgccagcggctcgaggatgacgtcggcagccagttcgtcgcgacgatcgagaacacc
cgccaattcccgatgacgcatcgcctgccggcaccgcggccggcgccgccgaagccgact
gcgacaaccttcgtctccgccgattcgcggatcgcggccatcgtgcagcgcgtcgcggtc
gctgccgcgcggaaaatgccgattctcattcgcggcgagaccggcaccggcaaggagcag
atggcgcgccacgcccacgcggcgagccgtcgcacaggatccttcgtcgcggtcaactgc
gccgcccttcccgacagcctgatcgaggccgagctgttcggctacaccgagggcgccttc
acgggcgcaaggaaaggcggctcggtgggcctgttcaaggaggccgatggcggcacgctg
ttcctcgacgagatcggcgacatgccggtgacgctgcaggcggtgctgctgcgcttcctc
gacgactggacggtgcggccggtcggcggcagcaagcgcgaggtcgacgtgctgctggtc
tcggccaccaacgccgatctcgacgacgccatcgcgagggggcgcttcaggtccgatctc
ttgtttcgcctcaacacgctcgaagtgaccttgctgccgctgcgcgagcgcaccgacttc
gccgagctcgcccgccatctgatgcagaagatcgatccgtcgatcgggctgtccgaggcc
gccatcgcgcggctcgcgcagcgcgactgggacggcaacatccgcgagctgcgcaatgtc
ctggcgcgcctctcgctccacgagaccggccccgtgatcgacgccgccgcggtctcgtcc
ctcatcgcccccggcagacctgagcgcgcgccgacgaaggcgacggcggacgaccgcgcg
ccggccgatctgcatgagatccagcgcgcgcatgtgctgaacacctacagcgaaaccggc
cacaacatcagcaagaccgcgcgccgtctcggcatctcgcgcaacaccgtctatcgcgcg
ctacgcggcaagccgggctga
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