Bradyrhizobium oligotrophicum: S58_14960
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Entry
S58_14960 CDS
T02484
Name
(GenBank) cell division cycle protein 48 homolog AF_1297
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
aol
Bradyrhizobium oligotrophicum
Pathway
aol04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
S58_14960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aol03019
]
S58_14960
03009 Ribosome biogenesis [BR:
aol03009
]
S58_14960
04131 Membrane trafficking [BR:
aol04131
]
S58_14960
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aol04147
]
S58_14960
Messenger RNA biogenesis [BR:
aol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
S58_14960
Ribosome biogenesis [BR:
aol03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
S58_14960
Membrane trafficking [BR:
aol04131
]
SNARE
SNARE associated proteins
Others
S58_14960
Autophagy
Aggrephagy
Other aggrephagy associated proteins
S58_14960
Exosome [BR:
aol04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
S58_14960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_22
AAA_14
TIP49
AAA_2
AAA_28
nSTAND3
AAA_33
IstB_IS21
AAA_18
AAA_7
Mg_chelatase
ABC_tran
NPHP3_N
AAA_3
TsaE
Zeta_toxin
RNA_helicase
NACHT
Sigma54_activat
AAA_19
ATPase
NTPase_1
AAA_30
bpMoxR
AAA_25
PhoH
Sigma54_activ_2
SLFN-g3_helicase
DUF815
Parvo_NS1
AAA_11
CDC48_2
Motif
Other DBs
NCBI-ProteinID:
BAM87504
UniProt:
M4Z362
LinkDB
All DBs
Position
1732745..1734874
Genome browser
AA seq
709 aa
AA seq
DB search
MQRTVAEARAGDAGRGIIRLDPSDLALLGLSIGDVVEIRGRHCAYGRALPTHPDQRGLGR
VLIDGTGRTNAGAGLGDLVSLVAAHTRPADEVTIAFDGFRPPRPGLFARRVSDAFRDMTV
AAGHVVRLRLIGGRDLSGRICATSPEGAVVISRDTRITFAAASGEAPPRTICYEDLGGLS
RELARVREMIELPIRRPDLFARLGIEAPKGVLLSGPPGTGKTLLARAVAQECEAAFFQID
GPEIVSKHYGDSEAKLRSIFQKAQARAPAIIFIDEIDAIAPQRARLGGDRQLEGRLVAQL
LTLLDGVSSRGLVIVMAATNLPDNLDPALRRPGRLDREIAIGVPDRGGRLEILAIHTRGV
PLGPDVDLEQIAGATHGFVGADLAALVREAGMAALRRAAAFDSSALDGISLEDLCIGRAD
FDTALSEVRPSAIREVYTDVPRVRWSEIGGMAEIKQELIEAVIWPITKSSLFADLGVRPA
KGVLLTGPPGTGKTLLARALASEAQVNFIAVRGPELLDRFVGESERAVRDVFVKARATSP
TIIFFDEIDSLAPVRGLSGAVSDRVVAQLLTEIDGIEELKGVFLLAATNRIDQVDPALLR
PGRFDRVFEVPSPDCATRAQILDVQSARLPLGPDVDLGGIAASTEGFVGAELAAICQEAG
RMALRRAVARSSDAPIVIEQADLLAASNLVGCGRSIRTSRQATPRRRFW
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggaccgtcgcagaagcgcgcgcgggagatgccggacgcgggatcatcaggctc
gatcccagtgatctcgcgctgctcgggctttccatcggcgacgtcgtcgagatacgcggt
cgccattgcgcctatggccgcgcgcttcccacccatcccgaccagcgaggtctgggcagg
gtcctgatcgacggcaccggacgcacgaatgccggcgccggccttggcgatctcgtgtcg
ctggttgccgcccacacccgtccggccgatgaggtcacgattgcgttcgacggcttccgg
ccgccccgtcccggcctgttcgcccgtcgggtgtcggacgccttccgcgacatgaccgtc
gcggccggccatgtcgtccggctgcgcctgatcggaggtcgcgatctctccggccggatc
tgcgccaccagcccggagggcgcggtcgtcatcagtcgcgacacgcgcatcacgtttgcg
gcggcttccggcgaggccccgccgcgcaccatctgctatgaagacctcggcgggctgtcg
cgcgagcttgcgcgcgtgcgcgagatgatcgagctgccgatccgccggccggatctgttc
gcccggctgggcatcgaggcgcccaagggggtgctgctgtccgggccgcctggcaccggc
aagacgctgctggcgcgcgcggtcgcccaggaatgcgaagctgccttcttccagatcgat
ggtcccgaaatcgtctccaagcactatggggactccgaagcgaagttgcgcagcatcttc
cagaaggcgcaggcgagggcgccggcgatcatcttcatcgacgagatcgatgccatcgcg
ccccagcgcgcccggcttggtggcgaccgccagctcgaagggcggctggtggcccaattg
ctcaccttgctcgacggcgtttcctcccgcggcttggtgatcgtgatggccgccaccaac
ctgcctgacaatctcgacccggcgctgcgccgtcccggcaggctcgaccgcgagattgcg
atcggcgtaccggaccgcggcgggcgcctcgaaatcctcgccatccatacccgcggtgtg
ccgctcggcccggatgtcgatctcgagcagattgccggcgcgacccacggcttcgtcggc
gccgacctcgcagcactggtgcgcgaggccggaatggccgccctgcggcgcgcggctgcg
ttcgactcgagtgcgctcgacggcatctcgctcgaagatctctgcatcgggcgtgctgat
ttcgacacggcgctgtccgaggtccgcccctctgcgatccgggaagtgtacacggatgtg
ccgcgggtgcgctggagcgaaatcggcggaatggccgagatcaagcaggagctgatcgaa
gcggtgatctggccgatcacgaaatcctcgctgtttgcggatctcggcgtccggcccgcc
aagggcgtgctgctcaccggtccgcccggcaccggcaagacgctgttggcgcgcgcactc
gccagtgaagcgcaggtcaatttcatcgcggtgagaggccccgaactgctcgatcgcttc
gtcggcgagagcgagcgcgcggtgcgcgacgtgttcgtgaaggcgcgggcgacctcgccg
accatcatctttttcgatgagatcgactcgctcgcgccggtgcgcggcctgagcggggcg
gtgagcgatcgcgtggtggcacagctgctgaccgagatcgatggcatcgaggagctgaag
ggtgttttcctgctggccgccaccaaccggatcgatcaggtcgatccggcgctgctcagg
cccgggcgcttcgatcgcgtgttcgaggtgccgtcgcctgactgcgcaacgcgggcgcag
atcctggacgtgcaatccgcgaggctcccgctcggccccgatgtcgacctcggcggcatc
gccgcgagcaccgaaggcttcgttggcgccgagctcgccgcgatctgtcaggaagccggg
cgcatggcgttgcggcgcgcagtggcgcggagcagcgatgctccgatcgtgatcgaacag
gcggatcttctggccgcgtcgaacctggtcggatgcggccgaagcattcgcacatcgcgg
caggcaacaccaaggaggcggttctggtga
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