Bradyrhizobium oligotrophicum: S58_19880
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Entry
S58_19880 CDS
T02484
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aol
Bradyrhizobium oligotrophicum
Pathway
aol03420
Nucleotide excision repair
aol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
S58_19880
03430 Mismatch repair
S58_19880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aol03400
]
S58_19880
Enzymes [BR:
aol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
S58_19880
DNA repair and recombination proteins [BR:
aol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
S58_19880
MMR (mismatch excision repair)
Other MMR factors
S58_19880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAM87995
UniProt:
M4ZP38
LinkDB
All DBs
Position
complement(2285648..2288230)
Genome browser
AA seq
860 aa
AA seq
DB search
MTEPNRLSPFPAPDHQPVAGGIAARARAAASGGARYLAGLNPEQRDAVETLDGPVLVLAG
AGTGKTRVLTTRIAHILSQGRARPGEILSVTFTNKAAREMKTRLAEMLGQAVEGMPWLGT
FHSIAGRILRSHAELVQLKSNFTVLDTDDQIRLLKQLLQAENIDDKRWPARMLAGLIDGW
KNRGLMPSQVPSGEAAVFGNGKGGKLYASYQERLKILNAADFGDLLLECIRLFRENPDVL
RQYQNRFKFILVDEYQDTNVAQYLWLRLLSQAPSSSGSSLPGSTRQSIAASDEDGSPGHD
AARRPGDDEKSVAVPGATPPPKNICCVGDDDQSIYGWRGAEVDNILRFEHDFPGAKVIRL
ERNYRSTGHILAAASHLITHNEGRLGKTLRTEDVEGEKVTVTGAWDSEEEARGIGEEIEE
LQRKGEHLNDIAILVRASYQMREFEDRFVTLGLPYRVIGGPRFYERAEIRDALAYLRVIN
SPADDLAFERIVNVPKRGLGDATVQMLHDHARKRRIPLFEAARAVVETDELKPKARGSLR
QLVLQFERWRAQREVTPHTELAEIVLDESGYTEMWQKDRSADAAGRLDNLKELIRSMEEF
ENLHGFLEHISLVMDREGAADEDAVSLMTLHSAKGLEFDNVFLPGWEEGLFPSQRTLDEQ
GRAGLEEERRLAHVGLTRARRRAKLYFATNRRIHGTWTTTIPSRFLDELPAGSVEITESK
GGSGWGGAGGYGPSRFDNVESFGSSYSTPGWQRAQARRPGAARGATEGGFKEEQSPFSGR
DPFGGGFGGNFGRSKRGPLTIEGELVAKSTGTTSEFALDDRVFHQKFGYGRVVKIDGNKL
TIAFDKAGEKKVVDSFVERA
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcccaaccgcctgagcccttttcctgcgcccgaccaccagcccgtcgccggc
ggcatcgccgcgcgcgcccgtgccgctgcgagcggcggggcgcgctatctcgcgggcctc
aatccggagcagcgcgacgcggtcgagacgctcgacggcccggtgctggtgctggccggt
gcaggcaccggcaagacccgcgtgctgacgacgcgcatcgcgcatatcctgagccagggc
cgcgcacgcccgggtgaaatcctgtcggtgaccttcaccaacaaggccgcgcgcgagatg
aagacgcggctcgccgagatgctcggccaggcggtcgagggcatgccgtggctcggcacc
ttccactcgatcgccggccgcatcctgcgcagccatgccgagctggtgcagctgaagtcc
aacttcaccgtgctcgacactgacgaccagatccggctgctcaagcagttgctgcaggcc
gagaacatcgacgacaagcgctggccggcgcgcatgctggccgggctgatcgacggctgg
aagaaccgtggcctgatgccgtcccaggtgccgtctggcgaagccgccgtgttcggcaac
ggcaagggcggcaagctgtatgcgagctatcaggagcggctgaagatcctcaacgccgcc
gatttcggcgatctcctgctggagtgcatccggctgtttcgcgagaacccggacgtgctg
cggcagtatcagaaccgcttcaagttcatcctggtcgacgagtaccaggacaccaacgtc
gcgcaatatctctggctgcggctgctgtcgcaggccccatcgtcgtccggctcgtcattg
ccgggctcgacccggcaatccatcgcggcttcggacgaagatggatcaccgggccacgac
gcagcgcgtcggcccggcgatgacgagaagagcgttgcggttcctggcgccacccctcca
cccaagaacatctgctgcgtcggcgacgacgatcagtcgatctatggctggcgcggcgcc
gaggtcgacaacatcctgcgcttcgagcacgacttccccggcgccaaggtgatccggctg
gagcgcaactaccgctcgaccggccacatcttggcggccgcctcgcatttgatcacgcac
aatgaaggccggctcggcaagacgctgcgcaccgaggacgtcgagggtgagaaagtcacc
gtcaccggcgcgtgggactccgaggaggaagcccgcggcattggcgaggagatcgaggag
ctgcagcgcaagggcgagcatctcaacgacatcgccatcctggtgcgcgcctcataccag
atgcgcgaattcgaggaccgtttcgtcacgctcggcctgccctaccgcgtcatcggcggt
ccccgcttctacgagcgcgccgagatccgcgatgcgctggcttacttgcgcgtcatcaac
tcgccggccgacgacctcgccttcgagcgcatcgtcaacgtgccgaagcgcgggctcggc
gatgccaccgtgcagatgctgcacgatcacgcccgcaagcgccgtatcccgctgttcgag
gcggcgcgcgccgtggtcgagaccgacgagctgaagccgaaggcgcgcgggagcctgcgc
cagctcgtgctgcagttcgagcgctggcgcgcccagcgcgaggtgacgccgcacaccgag
ctcgccgagatcgtgctcgacgagagcggctataccgagatgtggcagaaggaccgctcg
gccgatgcggccgggcgcctcgacaatttgaaagagctcatccgctcgatggaggagttc
gagaatttgcacggcttcctcgagcacatctcgctggtgatggaccgcgagggcgccgcg
gacgaggacgcggtgtcgctgatgaccctgcactcggccaaggggctggagttcgacaac
gtgtttctgccgggctgggaggaaggtctgtttccgagccagcgcacgctcgacgaacag
ggccgtgccgggctcgaagaggagcgccgcctcgcccatgtcgggctgacccgcgcgcgc
cgtcgcgccaagctctatttcgccaccaaccgccgcatccacggcacctggaccacgacg
attccgtcgcgcttcctcgacgaattgccggccggcagcgtcgagatcacggaatccaag
ggcggctccggctggggcggcgccggcggctatggcccgtcgcgtttcgacaatgtcgaa
tccttcggatcgagctattccacgccgggctggcagcgcgcgcaggcgcgtcgccccggc
gcagcgcgcggggcgaccgaaggcggcttcaaggaagagcaatcgccattctcggggcgc
gatcctttcggcggcggctttggcggtaattttggccggagcaagcgcggaccgctgacc
atcgagggcgagctggtcgcgaaatcgaccggcaccacgtcggaattcgcactcgacgac
cgcgtgtttcaccagaagttcggctatggccgcgtcgtcaagatcgacggcaacaagctg
accatcgccttcgacaaggccggcgagaagaaggtcgtcgacagcttcgtcgagcgggcg
tga
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