Bradyrhizobium oligotrophicum: S58_27710
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Entry
S58_27710 CDS
T02484
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
aol
Bradyrhizobium oligotrophicum
Pathway
aol00330
Arginine and proline metabolism
aol00480
Glutathione metabolism
aol01100
Metabolic pathways
aol01110
Biosynthesis of secondary metabolites
aol04148
Efferocytosis
Module
aol_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
S58_27710
09106 Metabolism of other amino acids
00480 Glutathione metabolism
S58_27710
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
S58_27710
Enzymes [BR:
aol01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
S58_27710
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Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BAM88777
UniProt:
M4Z6H5
LinkDB
All DBs
Position
complement(3122535..3124892)
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AA seq
785 aa
AA seq
DB search
MDYFRRFTFLFAAPVFETDDLAGVRFNQIIEEIQRSGFEVVRARKLEDAEIAVQTDAAIG
CMIVDWGKKGLEGKTAALINLMRRRGLDFPIILLIRRKRFEDLPVEVLDFIDGYVFLSEE
TPAFIAKNLISRLKQYAETLKTPFFGTLVDYAEEGNQLWTCPGHNGGVFYSRSPIGRIFV
EHLGEAVFRDDLDNSVLDLGDLLTHEGPALRAQKEAAQIFGAEKTYFVLNGTSTSNKVVL
GALVTDGDLVLFDRNNHKAAHHGALLISGGFPIYIPTVRNPWGLIGPMRWDLLDEEHLRQ
QIRDNPLVKDPDAWRKPRPFRVAVVEQCTYDGTIHSAEMILKRIGHLCDYIMFDEAWAGF
MKFHPLYAGRFAMGLGELGPEAPGIIATQSTHKQLASFSQASQIHVKDRHIKGQRRRIEH
RRFNESFMQHASTSPFYPLFASLDVGAQMMKGRSGEVLWDDTIRLGIELRKKIRAMRREF
DEKEKDPARRWFFEPFVPDRVSIPDAANPGASHDVAWEAISTDQLATDASLWQLAPEAAW
HGFPDLAAGFTMTDPNKLTLLTPGFDRATGGYADHGIPAPVVAQYLRENRIVAEKNDLNS
LLFLLTPGVEASKAGTLISGLVAFKRLHDDNVLLEDAIPEFTRKRFGRYGKLRLRDLCGE
MHRFYREADVSALQAKQFQPQHMPEIAMSPREAARALMRNEVDYLPIDRIEGRIATTPFV
VYPPGIATIVPGERLSERAKPMIDYLKMFERAFNAFPGFDVEIQGLYKEIDESGRIRLHT
YVCAE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggattacttccgccgcttcaccttcctgttcgccgcgcccgtgttcgagaccgacgac
ctcgccggcgtccgcttcaaccagatcatcgaggagatccagcgatccggcttcgaggtc
gtgcgggcgcggaagctggaggatgccgagatcgccgtgcaaacggacgccgcgatcggc
tgcatgatcgtcgactggggcaagaagggcctggaaggcaagaccgcggcgctgatcaac
ctgatgcgccggcgcggcctggacttcccgatcatcctcctgatccggcgcaagcggttc
gaggatctgccggtcgaggtgctcgatttcatcgacggctatgtcttcctgtcggaggag
acgcccgccttcatcgccaagaacctgatcagccggctgaagcaatatgccgagaccttg
aagacgccgttcttcggcacgctggtggactatgccgaggaaggcaaccagctctggacc
tgccccgggcacaatggcggcgtgttctacagccgcagcccgatcggccggatcttcgtc
gagcatctcggcgaagccgtctttcgcgacgacctcgacaattccgtgctcgatctcggc
gatctcctcacccatgagggacctgctctgcgcgcgcaaaaggaagcagcgcagatcttc
ggtgccgagaagacctatttcgtcctcaacggcacctcgacgtccaacaaggtggtgctg
ggggcgctggtcaccgacggcgacctcgtgctgttcgatcgcaacaaccacaaggccgcc
catcatggcgcgctgctgatctcgggcggcttcccgatctatattccaacggttcgcaat
ccctggggccttatcggtccgatgcgctgggacctgctggacgaagagcatctgcggcag
cagatccgtgacaacccgctggtcaaggaccccgacgcctggcgcaagccgcgcccattc
cgcgtcgcagtggtcgagcagtgcacctatgacggcacgatccatagcgccgagatgatc
ctcaagcggatcggccacctctgcgactacatcatgttcgacgaggcctgggcgggcttc
atgaaatttcacccgctctatgccggtcgcttcgccatgggcctcggcgagctcggcccc
gaagctcccggcatcatcgccacgcaatcgacccacaagcagctcgcgagcttctcccag
gcgtcgcagatccacgtcaaggaccgccacatcaagggtcagcggcggcggatcgagcat
cggcgcttcaacgaaagcttcatgcagcacgcctcgacatcgccgttctacccgctgttc
gcctcgctcgacgtcggcgcgcagatgatgaagggccgctccggtgaggtgctgtgggac
gacacgatccggctcggcatcgaattgcgcaagaagatcagggcgatgcgcagggaattc
gacgagaaggagaaggatccggcacggcgctggttcttcgagccgttcgttccggatcgc
gtgtcgatccccgatgcggccaatcccggggcgagccatgatgtcgcctgggaagcgatc
tcgaccgaccagctcgcgaccgacgcctcgctctggcagctcgcgcccgaggcagcatgg
catggctttccggatctcgccgccggcttcaccatgaccgatccgaacaagctgacgttg
ctcaccccgggcttcgatcgcgccaccggcggctatgccgatcacggcatccccgcgccc
gtggtcgcgcaatatctgcgcgagaatcgtatcgtcgccgagaagaacgacctcaactcg
ctgctgttcctgctgacgcccggcgtcgaggcgagcaaggccggcaccctgatcagcggt
ctcgtcgcgttcaagcggctgcatgacgacaacgtgctgctggaggacgccatcccggag
ttcacgcgcaagcgctttgggcgttacggcaagctgcggctgcgcgacctctgcggcgag
atgcaccgcttctatcgcgaggccgatgtgagcgcgctgcaggcgaaacagttccagccg
cagcacatgccggagatcgcgatgtcgccgcgcgaggccgcgcgcgcgctgatgcgcaac
gaggtcgattacctgccgatcgaccggatcgaaggtcgcatcgcgacgacgccgttcgtg
gtctatccgccgggcatcgcgaccatcgtgccgggcgagcggctatccgagcgcgccaag
ccgatgatcgattatctcaagatgttcgagcgcgccttcaacgccttcccgggtttcgac
gtcgagattcaaggattgtacaaggagatcgacgaatctggccggatccggctccatacc
tatgtttgcgcagagtaa
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