Bradyrhizobium oligotrophicum: S58_32310
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Entry
S58_32310 CDS
T02484
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aol
Bradyrhizobium oligotrophicum
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aol03032
]
S58_32310
03400 DNA repair and recombination proteins [BR:
aol03400
]
S58_32310
Enzymes [BR:
aol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
S58_32310
DNA replication proteins [BR:
aol03032
]
Prokaryotic type
DNA Topoisomerases
S58_32310
DNA repair and recombination proteins [BR:
aol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
S58_32310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAM89229
UniProt:
M4Z712
LinkDB
All DBs
Position
complement(3690487..3693264)
Genome browser
AA seq
925 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDENFRMIWEVDPKAAG
RLNDIAKSLKGADRLILATDPDREGEAISWHVLEVLKEKRALKDQKIERVVFNAITKQAV
SEAMKHPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVPREYWSLIATLATPRGDTFEARLVGADGKKIQRLDIGTGVEAEDFKQALNAA
SYTVATVDAKPARRNPQAPFTTSTLQQEASRKLGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIAPEAITQVRKVIGEIYGNKYVPDSPRQYQAKAKNAQEAHEAIRPTDLSR
KPAELRKRLDDDQAKLYELIWTRTIASQMESAELERTTVDIIAKAGARTLELRATGQVIK
FDGFLALYQEGRDDEEDEDSRRLPQMSPNDPLKRQNLAVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILDVLKARGYVKLEKKRLHGEDKGRVVIAFLENFFRRYVEYDFTADLE
EQLDRISNNEIAWQQVLKDFWTGFIGAVDDIKDLRVAQVLDSLDEMLGPHIYPPREDGGD
VRQCPTCGTGRLNLKAGKFGAFVGCSNYPECRYTRPLAADSEAAADRILGQDPDTGRDVT
VKAGRFGPYIQLGEQKDYAEGEKPKRAGIPKGTQPSDVDLELALKLLSLPREIGRHPETG
LPITAGLGRFGPFVKHDKTYASLEAGDEVFDIGLNRAVTLIAEKIAKGPSKRFGADPGKA
LGEHPSLGAVAVKAGRYGAYVTAGGVNATIPGDKEKDTITLAEAIALLDERAAKGGGKKP
AKGKATKDKAAKPAKAPSKAAAKPKAGGDDDSPKPAKKAVAKKAAAKPKSDSTSKARAPV
AKAAKTSAKPAAKPPAKKSAGKARG
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgtcatcgtggagtcgcctgcgaaggccaagacgatcaataagtatctgggc
tcctcctacgaggttctggcctctttcggtcatgtccgcgaccttccggccaagaacggt
tccgtcgatccggatgagaatttccggatgatctgggaagtggaccccaaggcggccggc
cgactcaacgacatcgccaaatcgctgaagggtgctgaccgactgattctcgccaccgac
cctgatcgcgagggtgaggcgatttcctggcacgtgctggaggtgttgaaggagaaacgt
gcgctcaaggatcagaagatcgagcgcgtcgtcttcaacgccatcaccaagcaggccgtc
tcggaggcgatgaagcatccgcgccagatcgatggcgcgctggtcgatgcctacatggcg
cgccgcgcactcgattacctcgtgggcttcaccctctctcccgtcctgtggcgcaagctg
ccgggcgcccgctcggcggggcgcgtgcagtcggttgcgctgcggctggtctgtgatcgc
gagctcgagatcgagaagttcgtaccgcgcgaatactggtcgctgattgcaaccctggcg
acgccgcgtggcgacaccttcgaggcgcgtctcgtcggcgccgacggcaagaagatccag
cggctcgacatcggcaccggcgtcgaggccgaagacttcaagcaggcgctgaatgcggcg
agctacacggtcgcgaccgtcgacgccaagccggcgcggcgcaatccgcaggcccccttc
accacctcgacgctgcagcaggaagcgagccgcaagctcggcttcgcaccggcgcatacg
atgcgcatcgcgcagcgtctctatgaaggcatcgacatcggcggcgagaccaccggtctc
atcacctatatgcgaaccgacggcgtgcagatcgcgcccgaggcgatcacgcaggtgcgc
aaggtgatcggcgagatctacggcaacaaatacgtgccggacagcccgcgccagtaccag
gccaaggccaagaacgcgcaggaagcgcacgaggcgatccgtccgaccgacctgtcgcgc
aagccggccgagttgcgcaagcggctcgatgacgaccaggccaagctctacgagctgatc
tggacccgcaccatcgcgagccagatggagtcggccgagctcgaacgcaccacggtcgac
atcatcgccaaggcgggcgcccgcaccctggagctgcgcgccaccggccaggtcatcaag
ttcgacggcttcctcgcgctctaccaggaaggccgcgacgacgaggaggacgaggacagc
cgccggctgccgcagatgagcccgaacgatccgctcaagcgccagaacctcgcggtcacg
cagcacttcaccgagccgccgccgcgcttctcggaggcgtcgctggtcaagcgcatggag
gagctcggcatcggccggccctcgacctatgcctcgatcctcgatgtgctcaaggcccgc
ggctatgtgaagctggagaagaagcggctgcacggcgaggacaagggccgcgtcgtgatc
gcgttcctggagaacttcttccgccgctacgtcgaatatgatttcacggccgatctcgag
gagcagctcgaccgcatctccaacaacgagatcgcctggcagcaggtgctgaaggatttc
tggaccggcttcatcggcgccgtcgacgacatcaaggatctgcgcgtggcgcaggtgctc
gactcgctcgacgagatgctcggcccgcacatctatccgccgcgcgaggatggtggcgac
gtccggcaatgcccgacctgcggcactggacggctcaacctgaaggccggcaagttcggc
gccttcgtcggctgctccaactatccggagtgccgctacacccgcccgctcgccgccgac
agcgaagccgccgccgatcgcatcctcggccaggatccggacacgggacgcgacgtgacc
gtcaaggccggccgcttcggcccctacatccagctcggcgagcagaaggattatgccgaa
ggcgaaaagccgaagcgcgccggcatccccaagggcacgcaaccgtcggatgtcgatctc
gagctggcgctgaagctgctgtcgctgccgcgtgagatcggccggcatccggagacgggt
ctgccgatcacggcggggctcggccgcttcggaccgttcgtgaagcacgacaagacctat
gcgagcctggaggccggcgacgaggtgttcgacatcggcctcaaccgcgcggtcaccttg
attgccgagaagatcgccaagggtccgagcaagcgttttggtgccgatcccggcaaggcc
ttgggtgagcatccttcgctcggcgccgtcgccgtcaaggccggtcgctacggcgcctat
gtcaccgcgggcggcgtcaacgccaccattcccggcgacaaggaaaaggacacgatcacc
ctggccgaggcgatcgccctgctcgacgagcgcgccgccaagggtggcggcaagaagcca
gcgaagggcaaggctacgaaggacaaggctgcgaaaccggccaaggctccgagcaaggct
gccgcgaagccgaaggccggcggcgacgacgactcgccgaagcctgccaagaaggccgtc
gcgaagaaggccgcggccaagccgaaatcagactccaccagcaaggcgcgtgcgccggtt
gccaaggccgccaagacatcggcgaagcctgcggcaaagccgcctgccaagaagagcgcc
ggcaaggcccgcggatga
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