Bradyrhizobium oligotrophicum: S58_34990
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Entry
S58_34990 CDS
T02484
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aol
Bradyrhizobium oligotrophicum
Pathway
aol03420
Nucleotide excision repair
aol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
S58_34990
03430 Mismatch repair
S58_34990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aol03400
]
S58_34990
Enzymes [BR:
aol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
S58_34990
DNA repair and recombination proteins [BR:
aol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
S58_34990
MMR (mismatch excision repair)
Other MMR factors
S58_34990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAM89492
UniProt:
M4Z7Z5
LinkDB
All DBs
Position
complement(3994559..3996658)
Genome browser
AA seq
699 aa
AA seq
DB search
MGTVTRIRPTLSLDDEFADFDVREELERQLEQRLREVELDAGPALKAFQPAADADQLSLI
HAPHHTIRLIAPAGSGKTQTIINRVLHLAKMGTRPERILCLTFDNSAVRALREKVTEQLS
GLSAPHQNFQISTLNAFGYKILRDHFHAEHKQIIEAPRVWRLIKELKDTLASTDEGRKRH
DALPASLRFRFYSEFFGLLKNALFDPRATVPQKFADFMLTSKAGEVFFQSGSTSDEKKLV
IQAVYWMFKEYERLLQRERRMDFDDQKLRAVKCLDSSPNVLSLAQHQFDEIIVDEFQDIN
ELDFDFVSLIAQRARLVITGDDDQAIYGFRGCTPRYIIELEKHLGRQVESFELKRNYRCP
RNIVDHATRLIRHNQWRVEKNPIAHRLDDASIKVIESTTATAEAKMIATTIERVRRRNKE
LKFSDFAVLYRTNAQSLPIQLQFILRDIPYNVREQDNILHNNELEKLLGVLRAKLALSKN
QQPDPADAVLSLRSYFQYVDERILARLERAFEAVPSFFDALAGRSVLTLLPKLRESRFAS
VMQDVAKAPTLFKTLDILAKDFRGLRGMVGSLEDVIDNEVPLGEVYELAASFRGRVDAFV
DTVDNALKRAKEAKTGEEQDGVALATYFKAKGLQWHTVILTSCNEGLIPHKRAPVEDERR
LFYVALTRASSNLVVSYLKTSCKTRVAASTFLTQAGLHG
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggggacggtaacccgcatcaggcccacgctgtcgctggacgacgagttcgccgacttc
gatgtccgcgaagagctcgaacgtcagctcgagcaacggctgcgcgaggtcgaacttgat
gctgggcccgcactgaaagctttccagcctgccgcggatgccgaccaactctcgctcatc
catgcaccccatcacaccattcggctgatcgcgccggccggctcaggaaaaacccagacc
atcatcaacagggtgctgcatctcgccaaaatgggtacccgtcccgagcgcatcctctgt
ctgacattcgataactccgccgtcagggccctacgggagaaggtcacggagcagctttcc
ggcctctccgcgccgcaccagaacttccagataagtacgttgaacgcgttcggctacaag
attttgcgcgaccattttcacgccgagcacaagcagatcatcgaagcgcctcgtgtctgg
cgattgatcaaagagctgaaggacaccctcgcctcgacagacgagggccgtaagcggcac
gacgccctgccagcctctcttcgattccgcttctacagtgaattttttggcctcttgaaa
aatgccctcttcgacccgcgcgcgactgttccgcagaaattcgcggatttcatgctcacc
agcaaagccggtgaggtctttttccaatccggatcaacctccgacgaaaagaaactcgtc
attcaggccgtttactggatgttcaaggaatacgaacgcctgctccagcgcgagcggcgc
atggactttgatgaccagaagctccgcgccgtcaaatgcctggactcgtcccccaacgtc
ctttcactcgcccaacaccagtttgacgaaatcatcgtcgacgaattccaggatatcaac
gagctggatttcgattttgtgtccctgatcgctcagcgggcgcggctggtcatcaccggg
gacgatgatcaggccatctatggcttccggggctgtacgccgcgttacatcatcgaactc
gaaaaacacctcggacgtcaggtcgaaagcttcgagctcaaacgcaactaccgctgcccc
cgcaatatcgtcgaccacgctacgcgactgatccgccataaccaatggcgcgtcgagaag
aatcctatcgcgcaccgtttagacgatgcctccatcaaggtgatcgagtcaacgacggcc
actgccgaagccaagatgatcgccacgaccatcgaacgggtacgccggcgcaacaaggag
ctcaaattctctgacttcgccgtgctctaccgcaccaacgcccagagcctgccgatccag
ttgcagttcatcctccgcgacattccctacaacgttcgtgaacaggacaacattctgcac
aacaatgagttggagaaactgcttggtgtgttgcgtgcaaagctggccctcagcaagaac
cagcagccggacccggctgacgcggtcctgagcctaaggtcatattttcagtacgttgat
gaacggatcctggcgaggctcgaaagggccttcgaggccgtgccttctttctttgacgca
ctagcaggtcgatctgtgttaaccctcctgccgaagctccgggaaagccgttttgcctcc
gtcatgcaggacgtcgcgaaggcgcccacactcttcaagacgctggatattcttgccaag
gatttccgggggcttcgcggcatggtcggcagcctcgaggacgtgatcgataacgaagtc
ccccttggtgaagtctacgaattggccgctagcttccgcggccgcgtcgatgctttcgtc
gacaccgtggacaacgccctcaagcgcgcaaaagaggccaagacgggcgaagagcaagat
ggcgtcgcgctggcgacctacttcaaggccaaggggctgcaatggcacaccgtaatcctg
accagctgcaacgaagggctcattccccacaaacgcgcgcccgtcgaggatgaacggcgc
cttttctatgttgcgttgacgagagcctcttcgaacctggtcgtcagttatctgaagacg
tcctgtaaaacccgcgtggcggccagtacattcctcacgcaggccggtctgcatggctag
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